RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 PROCA1Q8NCQ7 364 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-209ENST00000544349 DDX12PQ92771 950 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 POLR3CQ9BUI4 534 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-209ENST00000544349 ADD3Q9UEY8 706 aaKnown RBP15.94■□□□□ 0.14
VPS33A-209ENST00000544349 MAPK8IP1Q9UQF2 711 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS33A-209ENST00000544349 UBIAD1Q9Y5Z9 338 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 POTEFA5A3E0 1075 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 PLA2G4BP0C869 781 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 MRPS9P82933 396 aaKnown RBP15.93■□□□□ 0.14
VPS33A-209ENST00000544349 POTEGQ6S5H5 508 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 POTEEQ6S8J3 1075 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 DYMQ7RTS9 669 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 NELFBQ8WX92 580 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 RMDN3Q96TC7 470 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 EIF2AK1Q9BQI3 630 aaKnown RBP15.93■□□□□ 0.14
VPS33A-209ENST00000544349 GTPBP4Q9BZE4 634 aaKnown RBP15.93■□□□□ 0.14
VPS33A-209ENST00000544349 PXMP2Q9NR77 195 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 KCNH4Q9UQ05 1017 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
VPS33A-209ENST00000544349 SOWAHDA6NJG2 315 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 STX10O60499 249 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 GAS7O60861 476 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 EIF2AK2P19525 551 aaKnown RBP15.92■□□□□ 0.14
VPS33A-209ENST00000544349 PPIL2Q13356 520 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 PLS1Q14651 629 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 ERCC6LQ2NKX8 1250 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 LBX2Q6XYB7 198 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 ZNF397Q8NF99 534 aaPredicted RBP15.92■□□□□ 0.14
VPS33A-209ENST00000544349 PURBQ96QR8 312 aaKnown RBP15.92■□□□□ 0.14
VPS33A-209ENST00000544349 WDR24Q96S15 920 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 PDCD2LQ9BRP1 358 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 WDR11Q9BZH6 1224 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 JADE2Q9NQC1 790 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 A0A0U1RQJ8 604 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 IPO5O00410 1097 aaKnown RBP15.92■□□□□ 0.14
VPS33A-209ENST00000544349 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 FCER1AP12319 257 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 RBL2Q08999 1139 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 STK4Q13043 487 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 STIM1Q13586 685 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 ARHGEF16Q5VV41 709 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 B3GNT9Q6UX72 402 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 ATRIPQ8WXE1 791 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 DNAJC19Q96DA6 116 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 RIT2Q99578 217 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 TEKT3Q9BXF9 490 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 MAF1Q9H063 256 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 ACAD9Q9H845 621 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 MRPL44Q9H9J2 332 aaKnown RBP15.92■□□□□ 0.14
VPS33A-209ENST00000544349 KCNH7Q9NS40 1196 aa15.92■□□□□ 0.14
VPS33A-209ENST00000544349 ZSCAN12O43309 604 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 PSMC6P62333 389 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 LDLRAD1Q5T700 205 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 KCTD17Q8N5Z5 321 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 OPTNQ96CV9 577 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 HSD17B14Q9BPX1 270 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 BMP2KQ9NSY1 1161 aaPredicted RBP15.91■□□□□ 0.14
VPS33A-209ENST00000544349 DNM3Q9UQ16 869 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 A0A0G2JMZ2 1700 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 CHMP2AO43633 222 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
VPS33A-209ENST00000544349 PPP1R2P41236 205 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 CYP4A11Q02928 519 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 KRT31Q15323 416 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 COBLL1Q53SF7 1204 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 RAD9BQ6WBX8 426 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 CPLX3Q8WVH0 158 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 DHTKD1Q96HY7 919 aaPredicted RBP15.91■□□□□ 0.14
VPS33A-209ENST00000544349 UNC45AQ9H3U1 944 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 TUFT1Q9NNX1 390 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 RGL1Q9NZL6 768 aa15.91■□□□□ 0.14
VPS33A-209ENST00000544349 AKR1B15C9JRZ8 316 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-209ENST00000544349 PSMA7O14818 248 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 MYCLP12524 364 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-209ENST00000544349 IDEP14735 1019 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 CYP11B2P19099 503 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 EHHADHQ08426 723 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-209ENST00000544349 GPBP1Q86WP2 473 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 MB21D1Q8N884 522 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 SYT2Q8N9I0 419 aaPredicted RBP15.9■□□□□ 0.14
VPS33A-209ENST00000544349 KIAA0895Q8NCT3 520 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 AGO4Q9HCK5 861 aaKnown RBP15.9■□□□□ 0.14
VPS33A-209ENST00000544349 A1CFQ9NQ94 594 aaKnown RBP15.9■□□□□ 0.14
VPS33A-209ENST00000544349 CYP39A1Q9NYL5 469 aa15.9■□□□□ 0.14
VPS33A-209ENST00000544349 MFAP3LO75121 409 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 SLITRK3O94933 977 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 GYPCP04921 128 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 PSMD2Q13200 908 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 MTMR1Q13613 665 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 XRRA1Q6P2D8 792 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 SMAP1Q8IYB5 467 aaPredicted RBP15.89■□□□□ 0.13
VPS33A-209ENST00000544349 CHST13Q8NET6 341 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 HPS3Q969F9 1004 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 DYDC2Q96IM9 177 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 SLC39A2Q9NP94 309 aa15.89■□□□□ 0.13
VPS33A-209ENST00000544349 TAB2Q9NYJ8 693 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms