RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 TREHO43280 583 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ARP10275 920 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ATP2A2P16615 1042 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SREBF1P36956 1147 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 RAB30Q15771 203 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 CEP55Q53EZ4 464 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ATP6V0A1Q93050 837 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PHKBQ93100 1093 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PCYT2Q99447 389 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ZMYND12Q9H0C1 365 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 GLT8D2Q9H1C3 349 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 NKX2-4Q9H2Z4 354 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SETD4Q9NVD3 440 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MSRAQ9UJ68 235 aa15□□□□□ -0.01
TNFRSF1A-215ENST00000543359 BAIAP3O94812 1187 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PARNO95453 639 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ACTN1P12814 892 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 IFNAR1P17181 557 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 TCF7P36402 384 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SP4Q02446 784 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ITGB3BPQ13352 177 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MKRN4PQ13434 485 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 UTP14CQ5TAP6 766 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PHOSPHO2Q8TCD6 241 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SEPT1Q8WYJ6 367 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 OSBPL7Q9BZF2 842 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 FTOQ9C0B1 505 aaKnown RBP eCLIP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 NCOA5Q9HCD5 579 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PKD2L1Q9P0L9 805 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PCDHA11Q9Y5I1 949 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 KAT6AQ92794 2004 aa14.99□□□□□ -0.01
TNFRSF1A-215ENST00000543359 FAM86B1E9PN63 330 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 EDIL3O43854 480 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PPFIA3O75145 1194 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 LGR5O75473 907 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 CYP3A4P08684 503 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 FAM86B2P0C5J1 330 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 THPOP40225 353 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 JAKMIP3Q5VZ66 844 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 LMBR1Q8WVP7 490 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SLC9A7Q96T83 725 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 EHMT1Q9H9B1 1298 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 AGO4Q9HCK5 861 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 CYP46A1Q9Y6A2 500 aa14.98□□□□□ -0.01
TNFRSF1A-215ENST00000543359 NFASCO94856 1347 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 IGLV3-22A0A075B6J6 115 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ARHGEF15O94989 841 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 FOSL2P15408 326 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 WDR5P61964 334 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 CCT2P78371 535 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ADGRE1Q14246 886 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MARCH8Q5T0T0 291 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 CNKSR3Q6P9H4 555 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 NIPA1Q7RTP0 329 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 HERC6Q8IVU3 1022 aa14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 MAFAQ8NHW3 353 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ZNF274Q96GC6 653 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 LARP6Q9BRS8 491 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 JPH1Q9HDC5 661 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ZNF215Q9UL58 517 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-215ENST00000543359 BDP1A6H8Y1 2624 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 EMSYQ7Z589 1322 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 NRCAMQ92823 1304 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 RSPH10B2B2RC85 870 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 DHX15O43143 795 aaKnown RBP14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ATG7O95352 703 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 RSPH10BP0C881 870 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 IL17RAQ96F46 866 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SLC26A6Q9BXS9 759 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 PRDM12Q9H4Q4 367 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SLC28A3Q9HAS3 691 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 ERAP1Q9NZ08 941 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 SLC9A2Q9UBY0 812 aa14.96□□□□□ -0.01
TNFRSF1A-215ENST00000543359 IGKV6D-21A0A0A0MT36 114 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ABHD14A-ACY1A0A1B0GW23 586 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 MBLAC1A4D2B0 266 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CAND2O75155 1236 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CCNE2O96020 404 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CA3P07451 260 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 GNAT1P11488 350 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 ACTR2P61160 394 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 DEFB103AP81534 67 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 PLEKHG4Q58EX7 1191 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 FAM26DQ5JW98 314 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 RUFY4Q6ZNE9 571 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 RPAINQ86UA6 219 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 REXO1Q8N1G1 1221 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 USP38Q8NB14 1042 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 DBF4BQ8NFT6 615 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 RASGRP4Q8TDF6 673 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 SMARCAD1Q9H4L7 1026 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 C6orf50Q9HD87 102 aa14.95□□□□□ -0.02
TNFRSF1A-215ENST00000543359 CHRNA1P02708 482 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 MARK3P27448 753 aa14.94□□□□□ -0.02
TNFRSF1A-215ENST00000543359 GNA11P29992 359 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms