RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 RAD21O60216 631 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 DNAJC8O75937 253 aaPredicted RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 ATP1A1P05023 1023 aaKnown RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 TBX2Q13207 712 aaPredicted RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 CUL4BQ13620 913 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 PNMA1Q8ND90 353 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 PHF20Q9BVI0 1012 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 ARHGEF10LQ9HCE6 1279 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 DLGAP2Q9P1A6 1054 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 USH1CQ9Y6N9 552 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 MYH15Q9Y2K3 1946 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 GNAQP50148 359 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 PICALMQ13492 652 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 AENQ8WTP8 325 aaKnown RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.33□□□□□ -0.44
CDH4-201ENST00000543233 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 LNPEPQ9UIQ6 1025 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 BCL9LQ86UU0 1499 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 PLCH1Q4KWH8 1693 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 SCG2P13521 617 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 RFC5P40937 340 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 DEUP1Q05D60 604 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 HDAC7Q8WUI4 952 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 CTNNBL1Q8WYA6 563 aaPredicted RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 JAKMIP2Q96AA8 810 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
CDH4-201ENST00000543233 FAM81BQ96LP2 452 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 SUN2Q9UH99 717 aa12.33□□□□□ -0.44
CDH4-201ENST00000543233 CICQ96RK0 1608 aaPredicted RBP12.32□□□□□ -0.44
CDH4-201ENST00000543233 SPATA31A6Q5VVP1 1343 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 TMOD1P28289 359 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 ALS2CLQ60I27 953 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 ABTB1Q969K4 478 aaPredicted RBP12.32□□□□□ -0.44
CDH4-201ENST00000543233 UIMC1Q96RL1 719 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 ARPC5LQ9BPX5 153 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 ZWILCHQ9H900 591 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 DDX60Q8IY21 1712 aaKnown RBP12.32□□□□□ -0.44
CDH4-201ENST00000543233 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 ACTN4O43707 911 aaKnown RBP12.32□□□□□ -0.44
CDH4-201ENST00000543233 FAM200BP0CF97 657 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 STAT6P42226 847 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 GPSM2P81274 684 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 MDM2Q00987 491 aaPredicted RBP12.32□□□□□ -0.44
CDH4-201ENST00000543233 ADAM9Q13443 819 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 NDNQ99608 321 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 SLX1AQ9BQ83 275 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
CDH4-201ENST00000543233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDH4-201ENST00000543233 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 SUPT3HO75486 399 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 SLURP2P0DP57 97 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 EPHB4P54760 987 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 AMPD2Q01433 879 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 IQCEQ6IPM2 695 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 CLEC10AQ8IUN9 316 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 IFT81Q8WYA0 676 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 LRP5O75197 1615 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 LRRC10BA6NIK2 292 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 A8MUI8 341 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 CASP14P31944 242 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 PRR5LQ6MZQ0 368 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 TYW1BQ6NUM6 668 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 LCA5Q86VQ0 697 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 CNKSR1Q969H4 720 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 MED15Q96RN5 788 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 TFR2Q9UP52 801 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 UTRNP46939 3433 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 E2F6O75461 281 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 EPB41P11171 864 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 CD44P16070 742 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 BTDP43251 543 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 MRPS35P82673 323 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 GRAPQ13588 217 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 NPY5RQ15761 445 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 FNBP4Q8N3X1 1017 aaPredicted RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 SNRNP27Q8WVK2 155 aaKnown RBP12.31□□□□□ -0.44
CDH4-201ENST00000543233 SYT15Q9BQS2 421 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 LRRC1Q9BTT6 524 aa12.31□□□□□ -0.44
CDH4-201ENST00000543233 NACA2Q9H009 215 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms