RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 STYK1Q6J9G0 422 aa20.57■□□□□ 0.88
COPS7A-215ENST00000543155 LSM14BQ9BX40 385 aaKnown RBP20.57■□□□□ 0.88
COPS7A-215ENST00000543155 SUGCTQ9HAC7 445 aa20.57■□□□□ 0.88
COPS7A-215ENST00000543155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.57■□□□□ 0.88
COPS7A-215ENST00000543155 KIF13BQ9NQT8 1826 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 CCDC66A2RUB6 948 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 PLSCR1O15162 318 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 MOCS3O95396 460 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 PRLRP16471 622 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 IKQ13123 557 aaPredicted RBP20.56■□□□□ 0.88
COPS7A-215ENST00000543155 USH1GQ495M9 461 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 MAP9Q49MG5 647 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 CATSPER3Q86XQ3 398 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 ACBD3Q9H3P7 528 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 RBAK-RBAKDNI3L0D1 243 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 ZNF185O15231 689 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 BMP3P12645 472 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 RPA1P27694 616 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 SNAP25P60880 206 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 RAD51AP2Q09MP3 1159 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 SLC9C1Q4G0N8 1177 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 SFMBT2Q5VUG0 894 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 LENG9Q96B70 501 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 FAM20AQ96MK3 541 aa20.56■□□□□ 0.88
COPS7A-215ENST00000543155 RNF216Q9NWF9 866 aaPredicted RBP20.56■□□□□ 0.88
COPS7A-215ENST00000543155 PDE2AO00408 941 aaPredicted RBP20.55■□□□□ 0.88
COPS7A-215ENST00000543155 ENTPD3O75355 529 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 NOL4O94818 638 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 SERPING1P05155 500 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 TDRD12Q587J7 1177 aaKnown RBP20.55■□□□□ 0.88
COPS7A-215ENST00000543155 FAM83BQ5T0W9 1011 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 BTNL9Q6UXG8 535 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 ZNF572Q7Z3I7 529 aaPredicted RBP20.55■□□□□ 0.88
COPS7A-215ENST00000543155 NLRC4Q9NPP4 1024 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 DNM3Q9UQ16 869 aa20.55■□□□□ 0.88
COPS7A-215ENST00000543155 H0YIN7 160 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 GFPT1Q06210 699 aaPredicted RBP20.54■□□□□ 0.88
COPS7A-215ENST00000543155 ADAM9Q13443 819 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 GIT2Q14161 759 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 RBM26Q5T8P6 1007 aaKnown RBP20.54■□□□□ 0.88
COPS7A-215ENST00000543155 SYT2Q8N9I0 419 aaPredicted RBP20.54■□□□□ 0.88
COPS7A-215ENST00000543155 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 ERICH4A6NGS2 130 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 FAM86B1E9PN63 330 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 CETN3O15182 167 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 FAM86B2P0C5J1 330 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 SPATA31C1P0DKV0 1188 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 CIITAP33076 1130 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 SYNPO2Q9UMS6 1093 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 HYOU1Q9Y4L1 999 aa20.54■□□□□ 0.88
COPS7A-215ENST00000543155 POLR2FP61218 127 aaKnown RBP20.53■□□□□ 0.88
COPS7A-215ENST00000543155 ITIH3Q06033 890 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 MSL1Q68DK7 614 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 CCDC70Q6NSX1 233 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 CREG2Q8IUH2 290 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 VIPAS39Q9H9C1 493 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 LUC7LQ9NQ29 371 aaKnown RBP20.53■□□□□ 0.88
COPS7A-215ENST00000543155 GH2P01242 217 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 TCP1P17987 556 aaKnown RBP20.53■□□□□ 0.88
COPS7A-215ENST00000543155 EPS15P42566 896 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 TAF3Q5VWG9 929 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 GPIHBP1Q8IV16 184 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 RNF10Q8N5U6 811 aaKnown RBP20.53■□□□□ 0.88
COPS7A-215ENST00000543155 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 REEP2Q9BRK0 252 aa20.53■□□□□ 0.88
COPS7A-215ENST00000543155 TDRD3Q9H7E2 651 aaKnown RBP20.53■□□□□ 0.88
COPS7A-215ENST00000543155 TLR2O60603 784 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 PSMC6P62333 389 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 C2orf54Q08AI8 447 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 PABPC4Q13310 644 aaKnown RBP eCLIP20.52■□□□□ 0.885e-9■□□□□ 9.2
COPS7A-215ENST00000543155 MMGT1Q8N4V1 131 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 DRC1Q96MC2 740 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 NOX5Q96PH1 765 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 OSBPL9Q96SU4 736 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 VAV3Q9UKW4 847 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 TRAF3IP3Q9Y228 551 aa20.52■□□□□ 0.88
COPS7A-215ENST00000543155 LRRIQ3A6PVS8 624 aaPredicted RBP20.51■□□□□ 0.87
COPS7A-215ENST00000543155 MEIS1O00470 390 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 MSH4O15457 936 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 CYP3A4P08684 503 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 NR2F2P24468 414 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 JAG1P78504 1218 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 RASSF7Q02833 373 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 EPM2AIP1Q7L775 607 aaPredicted RBP20.51■□□□□ 0.87
COPS7A-215ENST00000543155 SFR1Q86XK3 245 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 PSD3Q9NYI0 1048 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 OPLAHO14841 1288 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 APBA3O96018 575 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 CASP5P51878 434 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 AOC3Q16853 763 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 KNOP1Q1ED39 458 aaKnown RBP20.51■□□□□ 0.87
COPS7A-215ENST00000543155 HSP90B2PQ58FF3 399 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 FRMD5Q7Z6J6 570 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 FAM71BQ8TC56 605 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 RUBCNQ92622 972 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 CRACR2AQ9BSW2 395 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 POLR3CQ9BUI4 534 aaPredicted RBP20.51■□□□□ 0.87
COPS7A-215ENST00000543155 GANQ9H2C0 597 aa20.51■□□□□ 0.87
COPS7A-215ENST00000543155 ZNF219Q9P2Y4 722 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms