RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 LRRC15Q8TF66 581 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 KAT2BQ92831 832 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 SPATA33Q96N06 139 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 CLIC6Q96NY7 704 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 C16orf70Q9BSU1 422 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 TEKT3Q9BXF9 490 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 WRAP73Q9P2S5 460 aaPredicted RBP12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 PCDHA12Q9UN75 941 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 SRPRBQ9Y5M8 271 aaKnown RBP12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 FRMPD3Q5JV73 1810 aa12.05□□□□□ -0.48
NPIPB3-210ENST00000542817 SPTLC2O15270 562 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 PPP6R2O75170 966 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 LGR5O75473 907 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 BMP15O95972 392 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 GJB1P08034 283 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 SPATA31C1P0DKV0 1188 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 RARBP10826 455 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 ATP4AP20648 1035 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 CST5P28325 142 aaPredicted RBP12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 CDC25AP30304 524 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 KRT85P78386 507 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 LRRC41Q15345 812 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 ECM1Q16610 540 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 FSCN1Q16658 493 aaKnown RBP12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 UGCGQ16739 394 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 SLFN12Q8IYM2 578 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 GIMAP8Q8ND71 665 aaPredicted RBP12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 SDF4Q9BRK5 362 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 MLXIPQ9HAP2 919 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 XPNPEP3Q9NQH7 507 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 PCDHA7Q9UN72 937 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 ELP1O95163 1332 aa12.04□□□□□ -0.48
NPIPB3-210ENST00000542817 VWA3AA6NCI4 1184 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 CHMP2AO43633 222 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 ZNF862O60290 1169 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 MSCO60682 206 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SLITRK3O94933 977 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SGPL1O95470 568 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SUPT20HL2P0C7V6 817 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 GJA8P48165 433 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 KRT76Q01546 638 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SP4Q02446 784 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 PDIA5Q14554 519 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 STK38Q15208 465 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SHC4Q6S5L8 630 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 DTHD1Q6ZMT9 781 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 TRIM50Q86XT4 487 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 CCDC60Q8IWA6 550 aaPredicted RBP12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 SEPT1Q8WYJ6 367 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 DISC1Q9NRI5 854 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 CFAP45Q9UL16 551 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 CEP131Q9UPN4 1083 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 ATP6V1DQ9Y5K8 247 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 MAFBQ9Y5Q3 323 aaPredicted RBP12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 GRIN2DO15399 1336 aa12.03□□□□□ -0.48
NPIPB3-210ENST00000542817 A0A087X0B3 334 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 PPFIA4O75335 1185 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 MED24O75448 989 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 EPHA7Q15375 998 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 KCNA10Q16322 511 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 SMAP1Q8IYB5 467 aaPredicted RBP12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 RDM1Q8NG50 284 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 EPSTI1Q96J88 318 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 PNMA5Q96PV4 448 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 RGL1Q9NZL6 768 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 PCDHA10Q9Y5I2 948 aa12.02□□□□□ -0.49
NPIPB3-210ENST00000542817 EMSYQ7Z589 1322 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 IGSF9BQ9UPX0 1349 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 WDR64B1ANS9 1081 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 HAS3O00219 553 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 F2P00734 622 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 LGALS2P05162 132 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 PURAQ00577 322 aaKnown RBP12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 HIC1Q14526 733 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 GNASQ5JWF2 1037 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 NCAPH2Q6IBW4 605 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 KCNK18Q7Z418 384 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 UBE2Q1Q7Z7E8 422 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 CATSPER3Q86XQ3 398 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 KCNG4Q8TDN1 519 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 CEP89Q96ST8 783 aa12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 EIF2AK1Q9BQI3 630 aaKnown RBP12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 SCAND2PQ9GZW5 306 aaPredicted RBP12.01□□□□□ -0.49
NPIPB3-210ENST00000542817 SCN10AQ9Y5Y9 1956 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms