RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GSTA4O15217 222 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 GSNP06396 782 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 C8AP07357 584 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 LCP1P13796 627 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 SCAND1P57086 179 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 GJA9P57773 515 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 ST5P78524 1137 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 ADCY1Q08828 1119 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 CLUL1Q15846 466 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 ARHGAP44Q17R89 818 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 RRP12Q5JTH9 1297 aaKnown RBP4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 CYB5RLQ6IPT4 315 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 CRTC3Q6UUV7 619 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 CLEC4GQ6UXB4 293 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 CCDC103Q8IW40 242 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 C2orf69Q8N8R5 385 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 PANK1Q8TE04 598 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 PARD3BQ8TEW8 1205 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 DIO2Q92813 273 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 FBXW5Q969U6 566 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 TNIP3Q96KP6 325 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 KLHL11Q9NVR0 708 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 MINPP1Q9UNW1 487 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 LAMC3Q9Y6N6 1575 aa4.91□□□□□ -1.62
SFSWAP-211ENST00000542813 PDS5BQ9NTI5 1447 aa4.9□□□□□ -1.62
SFSWAP-211ENST00000542813 ATAD2BQ9ULI0 1458 aa4.9□□□□□ -1.62
SFSWAP-211ENST00000542813 H7C1D1 291 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 ARNTLO00327 626 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 TGM5O43548 720 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 H2AFYO75367 372 aaKnown RBP4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 ZRANB2O95218 330 aaKnown RBP eCLIP4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 PLS3P13797 630 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 IFNGR1P15260 489 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 CYP7A1P22680 504 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 GRK2P25098 689 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 CTSKP43235 329 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 SEPHS1P49903 392 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 NMIQ13287 307 aaPredicted RBP4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 ACAP2Q15057 778 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 TERF2Q15554 542 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 OGFOD3Q6PK18 319 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 B3GNT9Q6UX72 402 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 SEZ6L2Q6UXD5 910 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 OTOP1Q7RTM1 612 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 CATIPQ7Z7H3 387 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 KSR1Q8IVT5 923 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 CMIPQ8IY22 773 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 IFNL2Q8IZJ0 200 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 STK11IPQ8N1F8 1099 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 NME8Q8N427 588 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 ANKRD42Q8N9B4 389 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC35G2Q8TBE7 412 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 TEKT5Q96M29 485 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 TAAR9Q96RI9 348 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 SENP7Q9BQF6 1050 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 ASCC2Q9H1I8 757 aaPredicted RBP4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC12A5Q9H2X9 1139 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 IPPKQ9H8X2 491 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 NLRC4Q9NPP4 1024 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 PRDM10Q9NQV6 1147 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 C1GALT1Q9NS00 363 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 TOPORSQ9NS56 1045 aaPredicted RBP4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 GPATCH2Q9NW75 528 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 CLEC1BQ9P126 229 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 TPX2Q9ULW0 747 aaKnown RBP4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 SLC5A6Q9Y289 635 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 DAGLAQ9Y4D2 1042 aa4.9□□□□□ -1.63
SFSWAP-211ENST00000542813 MRC2Q9UBG0 1479 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 GOLGA8AA7E2F4 631 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 GOLGA8BA8MQT2 603 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 AP1G1O43747 822 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 CTNND1O60716 968 aaKnown RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 OFD1O75665 1012 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 KRT37O76014 449 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 PAPLNO95428 1278 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 MYL3P08590 195 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 AKAP5P24588 427 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 GRK3P35626 688 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 NOP2P46087 812 aaKnown RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 GPR3P46089 330 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 USP14P54578 494 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 LMOD3Q0VAK6 560 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 CHAF1AQ13111 956 aaPredicted RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 STK3Q13188 491 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 CYP27C1Q4G0S4 372 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 IQCEQ6IPM2 695 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 C1orf228Q6PIY5 440 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 C16orf59Q7L2K0 433 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 CHST15Q7LFX5 561 aaPredicted RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 SRLQ86TD4 932 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 RASSF3Q86WH2 238 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 DTWD2Q8NBA8 298 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 BCL7CQ8WUZ0 217 aaPredicted RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 MISP3Q96FF7 219 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 FCRL3Q96P31 734 aaPredicted RBP4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 HERPUD2Q9BSE4 406 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 BOCQ9BWV1 1114 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 KCNH3Q9ULD8 1083 aa4.89□□□□□ -1.63
SFSWAP-211ENST00000542813 DNM3Q9UQ16 869 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms