RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 KCNJ15Q99712 375 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 SLC6A20Q9NP91 592 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 NAP1L2Q9ULW6 460 aaPredicted RBP7.42□□□□□ -1.22
XRCC4-206ENST00000542685 AKNAQ7Z591 1439 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 NCOA2Q15596 1464 aa7.42□□□□□ -1.22
XRCC4-206ENST00000542685 TRAV20A0A0B4J274 112 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 MROH6A6NGR9 719 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 KIAA2012Q0VF49 1180 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 NTRK3Q16288 839 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 SPATS1Q496A3 300 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 NAALADL2Q58DX5 795 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 TMC5Q6UXY8 1006 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 LBX2Q6XYB7 198 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 RBM12BQ8IXT5 1001 aaKnown RBP7.41□□□□□ -1.22
XRCC4-206ENST00000542685 CKAP2LQ8IYA6 745 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 LRRC47Q8N1G4 583 aaKnown RBP7.41□□□□□ -1.22
XRCC4-206ENST00000542685 PNNQ9H307 717 aaKnown RBP7.41□□□□□ -1.22
XRCC4-206ENST00000542685 RBPJLQ9UBG7 517 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 ASH2LQ9UBL3 628 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 CROTQ9UKG9 612 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 PTPN23Q9H3S7 1636 aa7.41□□□□□ -1.22
XRCC4-206ENST00000542685 U2SURPO15042 1029 aaKnown RBP7.4□□□□□ -1.22
XRCC4-206ENST00000542685 ADRB1P08588 477 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 COL6A2P12110 1019 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 GRK2P25098 689 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 GRK3P35626 688 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 TERF1P54274 439 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 ZC3H6P61129 1189 aaKnown RBP7.4□□□□□ -1.22
XRCC4-206ENST00000542685 NFKB2Q00653 900 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 GRIN1Q05586 938 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 EFEMP1Q12805 493 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
XRCC4-206ENST00000542685 UTP14CQ5TAP6 766 aaKnown RBP7.4□□□□□ -1.22
XRCC4-206ENST00000542685 TRIM48Q8IWZ4 208 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 ANP32BQ92688 251 aaKnown RBP7.4□□□□□ -1.22
XRCC4-206ENST00000542685 LCORQ96JN0 433 aaPredicted RBP7.4□□□□□ -1.22
XRCC4-206ENST00000542685 L2HGDHQ9H9P8 463 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 INVSQ9Y283 1065 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 HFM1A2PYH4 1435 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 UACAQ9BZF9 1416 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 FGD5Q6ZNL6 1462 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 KDM5BQ9UGL1 1544 aa7.4□□□□□ -1.22
XRCC4-206ENST00000542685 CCDC18Q5T9S5 1454 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 CCDC85CA6NKD9 419 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 CYP1A1P04798 512 aaPredicted RBP7.39□□□□□ -1.23
XRCC4-206ENST00000542685 GNAT1P11488 350 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 ZNF28P17035 718 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 IL13P35225 146 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 MLLT6P55198 1093 aaPredicted RBP7.39□□□□□ -1.23
XRCC4-206ENST00000542685 KIZQ2M2Z5 673 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 TAF3Q5VWG9 929 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 BORAQ6PGQ7 559 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 OTOP3Q7RTS5 596 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 LGI4Q8N135 537 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 CLEC4DQ8WXI8 215 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 TMEM209Q96SK2 561 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 WASF3Q9UPY6 502 aa7.39□□□□□ -1.23
XRCC4-206ENST00000542685 CASKIN1Q8WXD9 1431 aa7.38□□□□□ -1.23
XRCC4-206ENST00000542685 GPR85P60893 370 aa7.38□□□□□ -1.23
XRCC4-206ENST00000542685 STYK1Q6J9G0 422 aa7.38□□□□□ -1.23
XRCC4-206ENST00000542685 CYP4F22Q6NT55 531 aa7.38□□□□□ -1.23
XRCC4-206ENST00000542685 HHIPL2Q6UWX4 724 aa7.38□□□□□ -1.23
XRCC4-206ENST00000542685 IFNL3Q8IZI9 196 aa7.38□□□□□ -1.23
XRCC4-206ENST00000542685 SAMD9Q5K651 1589 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 PHLDB1Q86UU1 1377 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 ZNF536O15090 1300 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 ANP32CO43423 234 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 LTFP02788 710 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 ITGB3P05106 788 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 SPIRE1Q08AE8 756 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 TUSC3Q13454 348 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 ZNF827Q17R98 1081 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 TBC1D10BQ4KMP7 808 aaPredicted RBP7.37□□□□□ -1.23
XRCC4-206ENST00000542685 PHF19Q5T6S3 580 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 DBX2Q6ZNG2 339 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 ZFYVE21Q9BQ24 234 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 SPATA9Q9BWV2 254 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 TANGO6Q9C0B7 1094 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 TMEM168Q9H0V1 697 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 ARHGEF11O15085 1522 aa7.37□□□□□ -1.23
XRCC4-206ENST00000542685 NKRFO15226 690 aaKnown RBP eCLIP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 PDPK1O15530 556 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 CYP7B1O75881 506 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 PLATP00750 562 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 SOD2P04179 222 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 HSP90B1P14625 803 aaKnown RBP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 MTERF2Q49AM1 385 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 VASNQ6EMK4 673 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 TRMT10BQ6PF06 316 aaKnown RBP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 ZCCHC14Q8WYQ9 949 aaKnown RBP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 RBM15Q96T37 977 aaKnown RBP eCLIP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 PFDN2Q9UHV9 154 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 CNOT11Q9UKZ1 510 aaKnown RBP7.36□□□□□ -1.23
XRCC4-206ENST00000542685 TRAF6Q9Y4K3 522 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 EHBP1L1Q8N3D4 1523 aa7.36□□□□□ -1.23
XRCC4-206ENST00000542685 ASXL2Q76L83 1435 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms