RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DEF6Q9H4E7 631 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 PCDHAC2Q9Y5I4 1007 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TNS1Q9HBL0 1735 aaKnown RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 SPDYE3A6NKU9 549 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 H0YIN7 160 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 PLEKP08567 350 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 CYP3A4P08684 503 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RHOXF2BP0C7M4 288 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 BMP3P12645 472 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 EIF4A3P38919 411 aaKnown RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RBM5P52756 815 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 CYP27A1Q02318 531 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 SHROOM1Q2M3G4 852 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 HERC4Q5GLZ8 1057 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RRAGAQ7L523 313 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 SYT2Q8N9I0 419 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RUBCNQ92622 972 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 GJA10Q969M2 543 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 ALS2CR12Q96Q35 445 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 P2RX7Q99572 595 aaKnown RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RHOXF2Q9BQY4 288 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 ABCB6Q9NP58 842 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 EMILIN3Q9NT22 766 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RNF216Q9NWF9 866 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 HDAC6Q9UBN7 1215 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 TFR2Q9UP52 801 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 AKR1B10O60218 316 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 SSBP05455 408 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 HOXD11P31277 338 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 CYP2C19P33261 490 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 BMT2Q1RMZ1 405 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 ARSHQ5FYA8 562 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 RBM26Q5T8P6 1007 aaKnown RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 HGSNATQ68CP4 663 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 CACNA2D4Q7Z3S7 1137 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 KRT26Q7Z3Y9 468 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 CCDC155Q8N6L0 562 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 CNKSR1Q969H4 720 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 MMS19Q96T76 1030 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 FGFBP2Q9BYJ0 223 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 TANGO6Q9C0B7 1094 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 HERC5Q9UII4 1024 aaKnown RBP7.23□□□□□ -1.25
PTPRO-208ENST00000542557 VAV3Q9UKW4 847 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 SNX12Q9UMY4 172 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 TRAF3IP3Q9Y228 551 aa7.23□□□□□ -1.25
PTPRO-208ENST00000542557 MACROD2A1Z1Q3 448 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 POTEFA5A3E0 1075 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 CETN3O15182 167 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 NOL4O94818 638 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 GDF11O95390 407 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 SERPING1P05155 500 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 POTEIP0CG38 1075 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 IRF5Q13568 498 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 MAP9Q49MG5 647 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 SLC9C1Q4G0N8 1177 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 PRR16Q569H4 304 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 POTEGQ6S5H5 508 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 POTEEQ6S8J3 1075 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 EPM2AIP1Q7L775 607 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 CATSPER3Q86XQ3 398 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 RNF10Q8N5U6 811 aaKnown RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 SUPT20HQ8NEM7 779 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 C7orf43Q8WVR3 580 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 POLR3CQ9BUI4 534 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 VIPAS39Q9H9C1 493 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 LUC7LQ9NQ29 371 aaKnown RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 DNM3Q9UQ16 869 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 CAPN6Q9Y6Q1 641 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 FAM86B1E9PN63 330 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 OPLAHO14841 1288 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 KRT18P05783 430 aaKnown RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 FAM86B2P0C5J1 330 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 TCP1P17987 556 aaKnown RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 STAT3P40763 770 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 GIT2Q14161 759 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 FAM83BQ5T0W9 1011 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 SFMBT2Q5VUG0 894 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 FRMD5Q7Z6J6 570 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 KCNV2Q8TDN2 545 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 SMCR8Q8TEV9 937 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 ACBD3Q9H3P7 528 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 DUSP10Q9Y6W6 482 aa7.22□□□□□ -1.25
PTPRO-208ENST00000542557 RBBP6Q7Z6E9 1792 aaKnown RBP7.22□□□□□ -1.25
PTPRO-208ENST00000542557 ATP8B3O60423 1300 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 NPHP3-ACAD11A0A0J9YXS1 232 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 MSH4O15457 936 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 SRGAP2O75044 1071 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 APBA3O96018 575 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 GH2P01242 217 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 MAGEA1P43355 309 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 CASP8Q14790 479 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 NELFCDQ8IXH7 590 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 CAGE1Q8TC20 777 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 LSM14BQ9BX40 385 aaKnown RBP7.21□□□□□ -1.25
PTPRO-208ENST00000542557 TDRD3Q9H7E2 651 aaKnown RBP7.21□□□□□ -1.25
PTPRO-208ENST00000542557 PSD3Q9NYI0 1048 aa7.21□□□□□ -1.25
PTPRO-208ENST00000542557 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms