RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 FBXL16Q8N461 479 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 LMBR1Q8WVP7 490 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 ATXN2LQ8WWM7 1075 aaKnown RBP17.9■□□□□ 0.46
VPS33A-206ENST00000542310 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 BARHL2Q9NY43 387 aa17.9■□□□□ 0.46
VPS33A-206ENST00000542310 CCDC196A0A1B0GTZ2 297 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 STXBP3O00186 592 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 ATP9AO75110 1047 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 HSPA4P34932 840 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 ADCY7P51828 1080 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 SP4Q02446 784 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 TCTN1Q2MV58 587 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 UTP14CQ5TAP6 766 aaKnown RBP17.89■□□□□ 0.45
VPS33A-206ENST00000542310 TYW1BQ6NUM6 668 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 RPAINQ86UA6 219 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 SEPT1Q8WYJ6 367 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 ERAP1Q9NZ08 941 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 NFASCO94856 1347 aa17.89■□□□□ 0.45
VPS33A-206ENST00000542310 PRRC2BQ5JSZ5 2229 aaKnown RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 RALGAPA2Q2PPJ7 1873 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 EPB41L2O43491 1005 aaKnown RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 GTPBP6O43824 516 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 ARHGEF15O94989 841 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 REC8O95072 547 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 RPLP2P05387 115 aaKnown RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 ARHGAP4P98171 946 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 FAM26DQ5JW98 314 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 TAF2Q6P1X5 1199 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 APBB2Q92870 758 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 RAD9AQ99638 391 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 MXRA8Q9BRK3 442 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 ZBED2Q9BTP6 218 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 ANO3Q9BYT9 981 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 TSPYL2Q9H2G4 693 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 JPH1Q9HDC5 661 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 FAM217BQ9NTX9 383 aaPredicted RBP17.88■□□□□ 0.45
VPS33A-206ENST00000542310 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
VPS33A-206ENST00000542310 REV3LO60673 3130 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 NLRC5Q86WI3 1866 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 GSTTP1A0A1W2PQM5 241 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 AMHP03971 560 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 CDC27P30260 824 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 SREBF1P36956 1147 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 CLK2P49760 499 aaKnown RBP17.87■□□□□ 0.45
VPS33A-206ENST00000542310 METAP2P50579 478 aaKnown RBP eCLIP17.87■□□□□ 0.45
VPS33A-206ENST00000542310 FGD1P98174 961 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 BLOC1S2Q6QNY1 142 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 DBF4BQ8NFT6 615 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 SEPT8Q92599 483 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 AGXT2Q9BYV1 514 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 SMARCAD1Q9H4L7 1026 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 TELO2Q9Y4R8 837 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 MTCH2Q9Y6C9 303 aa17.87■□□□□ 0.45
VPS33A-206ENST00000542310 V9GY48 417 aaPredicted RBP17.87■□□□□ 0.45
VPS33A-206ENST00000542310 ESYT2A0FGR8 921 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 MBLAC1A4D2B0 266 aaPredicted RBP17.86■□□□□ 0.45
VPS33A-206ENST00000542310 EPOPA6NHQ4 379 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 PPFIA1Q13136 1202 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 PFKFB3Q16875 520 aaPredicted RBP17.86■□□□□ 0.45
VPS33A-206ENST00000542310 CEP55Q53EZ4 464 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 MCTP2Q6DN12 878 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 NIPA1Q7RTP0 329 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 PPM1EQ8WY54 764 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 ARNTL2Q8WYA1 636 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 JAKMIP1Q96N16 626 aaKnown RBP17.86■□□□□ 0.45
VPS33A-206ENST00000542310 SDF4Q9BRK5 362 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 PRDM6Q9NQX0 595 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 KCNH7Q9NS40 1196 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 SLC9A2Q9UBY0 812 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 SNX14Q9Y5W7 946 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 TTC28Q96AY4 2481 aa17.86■□□□□ 0.45
VPS33A-206ENST00000542310 MUC3AQ02505 3323 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 LCHNA4D1U4 455 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 SMCO2A6NFE2 343 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 CTSHP09668 335 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 SCG2P13521 617 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 Q6ZUG5 572 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 CCDC12Q8WUD4 166 aaPredicted RBP17.85■□□□□ 0.45
VPS33A-206ENST00000542310 GLG1Q92896 1179 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 TNPO1Q92973 898 aaKnown RBP17.85■□□□□ 0.45
VPS33A-206ENST00000542310 LMCD1Q9NZU5 365 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 TUBE1Q9UJT0 475 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 INSL6Q9Y581 213 aa17.85■□□□□ 0.45
VPS33A-206ENST00000542310 RPS6KB1P23443 525 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 PSMA5P28066 241 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 ERVK-21P61565 698 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 MRPS5P82675 430 aaKnown RBP17.84■□□□□ 0.45
VPS33A-206ENST00000542310 HTRA4P83105 476 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-206ENST00000542310 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-206ENST00000542310 GRIK4Q16099 956 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 TMCO2Q7Z6W1 182 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-206ENST00000542310 RSPH3Q86UC2 560 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
VPS33A-206ENST00000542310 BRF1Q92994 677 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 ASB2Q96Q27 587 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 TGS1Q96RS0 853 aaKnown RBP17.84■□□□□ 0.45
VPS33A-206ENST00000542310 CERS4Q9HA82 394 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 PKD2L1Q9P0L9 805 aa17.84■□□□□ 0.45
VPS33A-206ENST00000542310 MYH9P35579 1960 aaKnown RBP17.83■□□□□ 0.44
VPS33A-206ENST00000542310 WDR81Q562E7 1941 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms