RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 PDE4DQ08499 809 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 KRT71Q3SY84 523 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 YTHDF3Q7Z739 585 aaKnown RBP18.34■□□□□ 0.53
PDCD2-208ENST00000541970 IQCKQ8N0W5 287 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 TBCKQ8TEA7 893 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 NLRC4Q9NPP4 1024 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 KCNQ5Q9NR82 932 aa18.34■□□□□ 0.53
PDCD2-208ENST00000541970 IRX1P78414 480 aaPredicted RBP18.33■□□□□ 0.53
PDCD2-208ENST00000541970 MAP2K1Q02750 393 aaPredicted RBP18.33■□□□□ 0.53
PDCD2-208ENST00000541970 GFPT1Q06210 699 aaPredicted RBP18.33■□□□□ 0.53
PDCD2-208ENST00000541970 KCNB1Q14721 858 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 ZKSCAN8Q15776 578 aaPredicted RBP18.33■□□□□ 0.53
PDCD2-208ENST00000541970 RC3H1Q5TC82 1133 aaKnown RBP18.33■□□□□ 0.53
PDCD2-208ENST00000541970 SH3RF1Q7Z6J0 888 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 CCDC63Q8NA47 563 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 TBC1D22AQ8WUA7 517 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 CNOT6LQ96LI5 555 aaKnown RBP18.33■□□□□ 0.53
PDCD2-208ENST00000541970 MTRQ99707 1265 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 SH2D4AQ9H788 454 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 COL4A1P02462 1669 aa18.33■□□□□ 0.53
PDCD2-208ENST00000541970 AP1G2O75843 785 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 ATP2B4P23634 1241 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 MRPL12P52815 198 aaKnown RBP18.33■□□□□ 0.52
PDCD2-208ENST00000541970 TTBK2Q6IQ55 1244 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 MAEAQ7L5Y9 396 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 CAVIN3Q969G5 261 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 SPEF2Q9C093 1822 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 PPEF1O14829 653 aaPredicted RBP18.33■□□□□ 0.52
PDCD2-208ENST00000541970 AKR1B1P15121 316 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 ITGB3BPQ13352 177 aaPredicted RBP18.33■□□□□ 0.52
PDCD2-208ENST00000541970 NONOQ15233 471 aaKnown RBP eCLIP18.33■□□□□ 0.52
PDCD2-208ENST00000541970 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
PDCD2-208ENST00000541970 USH1GQ495M9 461 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 CABP7Q86V35 215 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 TAX1BP1Q86VP1 789 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 CCDC170Q8IYT3 715 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 SLC39A2Q9NP94 309 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 SCAF8Q9UPN6 1271 aaKnown RBP18.33■□□□□ 0.52
PDCD2-208ENST00000541970 STK38LQ9Y2H1 464 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 PCDHAC2Q9Y5I4 1007 aa18.33■□□□□ 0.52
PDCD2-208ENST00000541970 KRT18P05783 430 aaKnown RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 MAGOHP61326 146 aaKnown RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 CACNB1Q02641 598 aaPredicted RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 DGKHQ86XP1 1220 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 REXO1Q8N1G1 1221 aaKnown RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 MAGOHBQ96A72 148 aaKnown RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 NOX5Q96PH1 765 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 ATP6V0A4Q9HBG4 840 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 CPSF2Q9P2I0 782 aaKnown RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 ATP2C1P98194 919 aaPredicted RBP18.32■□□□□ 0.52
PDCD2-208ENST00000541970 PLCB4Q15147 1175 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 MAD2L2Q9UI95 211 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 FLT1P17948 1338 aa18.32■□□□□ 0.52
PDCD2-208ENST00000541970 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 SPICE1Q8N0Z3 855 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 MYH3P11055 1940 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 MMP10P09238 476 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 IL17AQ16552 155 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 SALL4Q9UJQ4 1053 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 PCDHA6Q9UN73 950 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 PCDHA8Q9Y5H6 950 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 CTNND1O60716 968 aaKnown RBP18.31■□□□□ 0.52
PDCD2-208ENST00000541970 DIAPH2O60879 1101 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 GDF11O95390 407 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 ATP6V1G2O95670 118 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 PLCG1P19174 1290 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 TXNRD1Q16881 649 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 TRIM68Q6AZZ1 485 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 RAPGEF5Q92565 580 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 MTMR8Q96EF0 704 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
PDCD2-208ENST00000541970 POTEMA6NI47 508 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 TAL1P17542 331 aaPredicted RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 SLC1A4P43007 532 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 CAPRIN2Q6IMN6 1127 aaKnown RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 TAF4BQ92750 862 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 SAAL1Q96ER3 474 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 ATXN2Q99700 1313 aaKnown RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 GOLPH3Q9H4A6 298 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 DCDC2CA8MYV0 355 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 NKRFO15226 690 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 RAD51CO43502 376 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 ANP32DO95626 131 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 GNA11P29992 359 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 IFNAR2P48551 515 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 LRRC41Q15345 812 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 UHMK1Q8TAS1 419 aaKnown RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 CUL5Q93034 780 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 CALML4Q96GE6 196 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 AP1M1Q9BXS5 423 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 ARHGAP20Q9P2F6 1191 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 DAGLAQ9Y4D2 1042 aa18.3■□□□□ 0.52
PDCD2-208ENST00000541970 VIMP08670 466 aaKnown RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 PCP11498 1178 aaKnown RBP18.3■□□□□ 0.52
PDCD2-208ENST00000541970 PLCG2P16885 1265 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms