RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 PRR16Q569H4 304 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 SYDE2Q5VT97 1194 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 IQCEQ6IPM2 695 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 BTNL9Q6UXG8 535 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 ZNF572Q7Z3I7 529 aaPredicted RBP14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 CATSPER3Q86XQ3 398 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 TXLNBQ8N3L3 684 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 SMCR8Q8TEV9 937 aaPredicted RBP14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 FAM20AQ96MK3 541 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 JADE2Q9NQC1 790 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 FAM184BQ9ULE4 1060 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 CAPN6Q9Y6Q1 641 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 SLX4Q8IY92 1834 aa14.65□□□□□ -0.06
PRKAB1-206ENST00000541640 POTEFA5A3E0 1075 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 ENTPD3O75355 529 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 GDF11O95390 407 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 POTEIP0CG38 1075 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 ERCC3P19447 782 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 RPA1P27694 616 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 CIITAP33076 1130 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 CASP8Q14790 479 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 POTEEQ6S8J3 1075 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 NELFCDQ8IXH7 590 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 SUGCTQ9HAC7 445 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 SPDYE3A6NKU9 549 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 PDE2AO00408 941 aaPredicted RBP14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 KRT18P05783 430 aaKnown RBP14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 MAGEA1P43355 309 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 ITIH3Q06033 890 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 FAM83BQ5T0W9 1011 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 SYT2Q8N9I0 419 aaPredicted RBP14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 ALS2CR12Q96Q35 445 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 MLXIPQ9HAP2 919 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 PDE11AQ9HCR9 933 aa14.64□□□□□ -0.07
PRKAB1-206ENST00000541640 ZNF185O15231 689 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 MOCS3O95396 460 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 SERPING1P05155 500 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 SPATA31C1P0DKV0 1188 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 BMP3P12645 472 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 GIT2Q14161 759 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 SFMBT2Q5VUG0 894 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 CREG2Q8IUH2 290 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 CAGE1Q8TC20 777 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 LSM14BQ9BX40 385 aaKnown RBP14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 FAM86B1E9PN63 330 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 H0YIN7 160 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 CYP3A4P08684 503 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 FAM86B2P0C5J1 330 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 SNAP25P60880 206 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 ADAM9Q13443 819 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 MAP9Q49MG5 647 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 SLC9C1Q4G0N8 1177 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 RNF10Q8N5U6 811 aaKnown RBP14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 VIPAS39Q9H9C1 493 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 DNM3Q9UQ16 869 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 TRAF3IP3Q9Y228 551 aa14.63□□□□□ -0.07
PRKAB1-206ENST00000541640 KIF13BQ9NQT8 1826 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 OPLAHO14841 1288 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 CETN3O15182 167 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 TLR2O60603 784 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 PSMC6P62333 389 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 JAG1P78504 1218 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 RAD51AP2Q09MP3 1159 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 USH1GQ495M9 461 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 RBM26Q5T8P6 1007 aaKnown RBP14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 EPM2AIP1Q7L775 607 aaPredicted RBP14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 TEX2Q8IWB9 1127 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 MMGT1Q8N4V1 131 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 PDGFDQ9GZP0 370 aaPredicted RBP14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 TDRD3Q9H7E2 651 aaKnown RBP14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 NLRC4Q9NPP4 1024 aa14.62□□□□□ -0.07
PRKAB1-206ENST00000541640 CCDC66A2RUB6 948 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 PIK3CDO00329 1044 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 MSH4O15457 936 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 GH2P01242 217 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 TCP1P17987 556 aaKnown RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 GFPT1Q06210 699 aaPredicted RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 IKQ13123 557 aaPredicted RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 EXOC4Q96A65 974 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 ACBD3Q9H3P7 528 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 VAV3Q9UKW4 847 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 LRRIQ3A6PVS8 624 aaPredicted RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 POLR2FP61218 127 aaKnown RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.077e-11■■■□□ 16.4
PRKAB1-206ENST00000541640 TDRD12Q587J7 1177 aaKnown RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 FRMD5Q7Z6J6 570 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 OSBPL9Q96SU4 736 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 REEP2Q9BRK0 252 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 POLR3CQ9BUI4 534 aaPredicted RBP14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 GANQ9H2C0 597 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 ADAM21Q9UKJ8 722 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 HYOU1Q9Y4L1 999 aa14.61□□□□□ -0.07
PRKAB1-206ENST00000541640 MYH10P35580 1976 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms