RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 PRKACBP22694 351 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 SLC16A2P36021 539 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 SKIV2L2P42285 1042 aaKnown RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 PDE6CP51160 858 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 USP14P54578 494 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 DSTNP60981 165 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 B2MP61769 119 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 VSNL1P62760 191 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 IGBP1P78318 339 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 HPCAP84074 193 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 PLOD1Q02809 727 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 UBXN1Q04323 297 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 RUNX1T1Q06455 604 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 MCL1Q07820 350 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 NIPAL4Q0D2K0 466 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 FAM69CQ0P6D2 419 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 IRF5Q13568 498 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 LRP8Q14114 963 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 MAPRE1Q15691 268 aaKnown RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 SKIDA1Q1XH10 827 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 C10orf76Q5T2E6 689 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 MAP3K21Q5TCX8 1036 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 TCERG1LQ5VWI1 586 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 ATL3Q6DD88 541 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 OR52E8Q6IFG1 317 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 ANO7Q6IWH7 933 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 ARHGEF18Q6ZSZ5 1173 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CAND1Q86VP6 1230 aaKnown RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 RELL1Q8IUW5 271 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 FAM20CQ8IXL6 584 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.63□□□□□ -1.513e-7■■■■■ 36.2
SNHG1-218ENST00000541615 TMEM57Q8N5G2 664 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 RBBP8NLQ8NC74 664 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CCDC12Q8WUD4 166 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CCT6BQ92526 530 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 KIFC2Q96AC6 838 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CYFIP2Q96F07 1278 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 NRBF2Q96F24 287 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 ZSCAN31Q96LW9 406 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 NSMCE3Q96MG7 304 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 NEUROD6Q96NK8 337 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 SAMD11Q96NU1 681 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CDCA7Q9BWT1 371 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 SPATA16Q9BXB7 569 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CARD14Q9BXL6 1004 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 FTOQ9C0B1 505 aaKnown RBP eCLIP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CNOT10Q9H9A5 744 aaKnown RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 GID8Q9NWU2 228 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 HYPKQ9NX55 129 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 PTTG2Q9NZH5 202 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 KIAA1522Q9P206 1035 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 STK17AQ9UEE5 414 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 IP6K2Q9UHH9 426 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CHMP2BQ9UQN3 213 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CNPY2Q9Y2B0 182 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 HBS1LQ9Y450 684 aaKnown RBP5.63□□□□□ -1.51
SNHG1-218ENST00000541615 PCDHB4Q9Y5E5 795 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 PCDHB3Q9Y5E6 796 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 USP16Q9Y5T5 823 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 KIAA0232Q92628 1395 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 PLEKHG1Q9ULL1 1385 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 ADGRL3Q9HAR2 1447 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 IFT140Q96RY7 1462 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 CLTCL1P53675 1640 aa5.63□□□□□ -1.51
SNHG1-218ENST00000541615 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 A0A0B4J203 849 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 A0A0J9YVX5 310 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PVALEFA0A1B0GWK0 134 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 VWA3AA6NCI4 1184 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 GOLGA8BA8MQT2 603 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 FADS2P1A8MWK0 482 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 FAM47E-STBD1D6RA91 191 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 NDC80O14777 642 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 XPO1O14980 1071 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 SPTLC2O15270 562 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 RNASEH2AO75792 299 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 TOMM70O94826 608 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 FARP2O94887 1054 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ASMTLO95671 621 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 RPN1P04843 607 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 LDHCP07864 332 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PAEPP09466 180 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 GSTT2P0CG29 244 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 GSTT2BP0CG30 244 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 COL6A1P12109 1028 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 NQO1P15559 274 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 DNAJB2P25686 324 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 VARSP26640 1264 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PRKAR1BP31321 381 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 NEK4P51957 841 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ALDH18A1P54886 795 aaKnown RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 AP2B1P63010 937 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 UBXN2AP68543 259 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PTGDRQ13258 359 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ITGB3BPQ13352 177 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-218ENST00000541615 NR1D2Q14995 579 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 PPP2R5BQ15173 497 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ANO4Q32M45 955 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ANKDD1AQ495B1 522 aa5.62□□□□□ -1.51
SNHG1-218ENST00000541615 ODF2Q5BJF6 829 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms