RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 C9orf131Q5VYM1 1079 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 CCDC65Q8IXS2 484 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 PROCA1Q8NCQ7 364 aaPredicted RBP16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 ZRANB2O95218 330 aaKnown RBP eCLIP16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 NF2P35240 595 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 TUBB4BP68371 445 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 LRRC63Q05C16 580 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 PPATQ06203 517 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 MCM6Q14566 821 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 TTI2Q6NXR4 508 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 KRT222Q8N1A0 295 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 SYT2Q8N9I0 419 aaPredicted RBP16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 ZHX2Q9Y6X8 837 aa16.28■□□□□ 0.2
SPOCK3-226ENST00000541354 LGALS16A8MUM7 142 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 CXCL11O14625 94 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 GRIN3BO60391 1043 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 DDNO94850 711 aaPredicted RBP16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 COPB2P35606 906 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 FAM193AP78312 1265 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 EPHA7Q15375 998 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 CYP26C1Q6V0L0 522 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 OTOP1Q7RTM1 612 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 GPR161Q8N6U8 529 aaKnown RBP16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 RDM1Q8NG50 284 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 P2RX5Q93086 422 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 AGBL1Q96MI9 1066 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 SNCAIPQ9Y6H5 919 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 CLCN6P51797 869 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 CENPPQ6IPU0 288 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 ZNF662Q6ZS27 426 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 SYTL5Q8TDW5 730 aaPredicted RBP16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 DNAJC19Q96DA6 116 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 DESI2Q9BSY9 194 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 TEKT3Q9BXF9 490 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 CSADQ9Y600 493 aa16.27■□□□□ 0.2
SPOCK3-226ENST00000541354 IQCA1LA6NCM1 817 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 EYA4O95677 639 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 PLA2G4BP0C869 781 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 YBX3P16989 372 aaKnown RBP eCLIP16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 SLC12A3P55017 1021 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 RABGGTAQ92696 567 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 TBC1D22BQ9NU19 505 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 CHST13Q8NET6 341 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 DDX12PQ92771 950 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 ZKSCAN4Q969J2 545 aaPredicted RBP16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 DNAJC7Q99615 494 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 HSD17B14Q9BPX1 270 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 TAB2Q9NYJ8 693 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 SPATA31C1P0DKV0 1188 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 ERVK-24P63145 666 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 LRCH2Q5VUJ6 765 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 PPP4R3CPQ6ZMV5 832 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 TEX13BQ9BXU2 312 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 VPS16Q9H269 839 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 KIAA1024Q9UPX6 916 aa16.26■□□□□ 0.19
SPOCK3-226ENST00000541354 KIF5CO60282 957 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 LYPLA2O95372 231 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 GAP43P17677 238 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 CCDC84Q86UT8 332 aaPredicted RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 FBXO40Q9UH90 709 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 CAPN11Q9UMQ6 739 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 RNF225M0QZC1 329 aaPredicted RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 IRF6O14896 467 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 MED24O75448 989 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 DNM2P50570 870 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 PMS1P54277 932 aaKnown RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 ANKRD13AQ8IZ07 590 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 CPLX3Q8WVH0 158 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 DUSP9Q99956 384 aaKnown RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 EIF2AK1Q9BQI3 630 aaKnown RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 RAVER2Q9HCJ3 691 aaKnown RBP16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 PRDM4Q9UKN5 801 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 FHOD1Q9Y613 1164 aa16.25■□□□□ 0.19
SPOCK3-226ENST00000541354 POLR2AP24928 1970 aaKnown RBP16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 ALAS1P13196 640 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 ECM1Q16610 540 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 NCAPH2Q6IBW4 605 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 ERO1BQ86YB8 467 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 GPRASP2Q96D09 838 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 SENP7Q9BQF6 1050 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 ZNF577Q9BSK1 485 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 SEL1LQ9UBV2 794 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 ZNF214Q9UL59 606 aaPredicted RBP16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 KCNH4Q9UQ05 1017 aa16.24■□□□□ 0.19
SPOCK3-226ENST00000541354 UBE4BO95155 1302 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms