RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RLFQ13129 1914 aa11.52□□□□□ -0.56
CHFR-219ENST00000541341 BICDL2A1A5D9 508 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 TMCO5BA8MYB1 307 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 DLL1O00548 723 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 RNF40O75150 1001 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 GH2P01242 217 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 ASNSP08243 561 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
CHFR-219ENST00000541341 TNFRSF8P28908 595 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 KRT2P35908 639 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 CDR1P51861 262 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 EVX2Q03828 476 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.57
CHFR-219ENST00000541341 PAK1Q13153 545 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 CUL4BQ13620 913 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 WTAPQ15007 396 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 FIGNQ5HY92 759 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 ZNF658Q5TYW1 1059 aaPredicted RBP11.52□□□□□ -0.57
CHFR-219ENST00000541341 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 MCTP2Q6DN12 878 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 POTEEQ6S8J3 1075 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 TRAPPC11Q7Z392 1133 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 YTHDF3Q7Z739 585 aaKnown RBP11.52□□□□□ -0.57
CHFR-219ENST00000541341 SLC35F6Q8N357 371 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 ARFGAP2Q8N6H7 521 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 EIF1ADQ8N9N8 165 aaKnown RBP11.52□□□□□ -0.57
CHFR-219ENST00000541341 NUDT12Q9BQG2 462 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 WDR18Q9BV38 432 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 THAP9Q9H5L6 903 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 EMILIN3Q9NT22 766 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 MORF4L1Q9UBU8 362 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.57
CHFR-219ENST00000541341 PFASO15067 1338 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
CHFR-219ENST00000541341 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 GOLGA6BA6NDN3 693 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 SOWAHDA6NJG2 315 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 USP17L21D6R901 530 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 H3BQF6 201 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 LAD1O00515 517 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 KIF1CO43896 1103 aaKnown RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 TACC1O75410 805 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 ERLIN2O94905 339 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 NDUFA10O95299 355 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 HLA-DOAP06340 250 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 FGRP09769 529 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 CALML3P27482 149 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 CASP14P31944 242 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 LONP1P36776 959 aaKnown RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 PAFAH1B1P43034 410 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 TDO2P48775 406 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 ERVK-24P63145 666 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 GABPAQ06546 454 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 COL9A3Q14050 684 aaPredicted RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 KCNB1Q14721 858 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 SPA17Q15506 151 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 ISM2Q6H9L7 571 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 CHST3Q7LGC8 479 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 ZNF572Q7Z3I7 529 aaPredicted RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 GPR142Q7Z601 462 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 KIAA1328Q86T90 577 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 FOXP4Q8IVH2 680 aaPredicted RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 STK11IPQ8N1F8 1099 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 MMGT1Q8N4V1 131 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 CAGE1Q8TC20 777 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 STAG1Q8WVM7 1258 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 P3H4Q92791 437 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 ALS2CR12Q96Q35 445 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 GDF15Q99988 308 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 EDEM3Q9BZQ6 932 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 NUCKS1Q9H1E3 243 aaKnown RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 MRPL44Q9H9J2 332 aaKnown RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 LY9Q9HBG7 655 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 A1CFQ9NQ94 594 aaKnown RBP11.51□□□□□ -0.57
CHFR-219ENST00000541341 MCM9Q9NXL9 1143 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
CHFR-219ENST00000541341 A0A1W2PQJ5 194 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 PSMA7O14818 248 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 PRPF3O43395 683 aaKnown RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 HSF2BPO75031 334 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 CALRP27797 417 aaKnown RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 CNGA1P29973 690 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 KRT9P35527 623 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 COPB1P53618 953 aaKnown RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 EPHB4P54760 987 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 AMPD2Q01433 879 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 PPARAQ07869 468 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 DPYDQ12882 1025 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 LRRC26Q2I0M4 334 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 CCDC178Q5BJE1 867 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 GALNT17Q6IS24 598 aa11.5□□□□□ -0.57
CHFR-219ENST00000541341 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
CHFR-219ENST00000541341 LRRC31Q6UY01 552 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms