RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 RUFY4Q6ZNE9 571 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 NPM2Q86SE8 214 aaKnown RBP7.49□□□□□ -1.21
SUDS3-202ENST00000541280 C19orf47Q8N9M1 422 aaKnown RBP7.49□□□□□ -1.21
SUDS3-202ENST00000541280 GINM1Q9NU53 330 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 KIF20BQ96Q89 1820 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 KDM6AO15550 1401 aaPredicted RBP7.49□□□□□ -1.21
SUDS3-202ENST00000541280 RGPD5Q99666 1765 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 A0A087WZG4 1122 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 CD247P20963 164 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 CRKLP46109 303 aaKnown RBP7.48□□□□□ -1.21
SUDS3-202ENST00000541280 GJA8P48165 433 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 OR6P1Q8NGX9 317 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 PHACTR3Q96KR7 559 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 TNFRSF12AQ9NP84 129 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 SLC12A7Q9Y666 1083 aa7.48□□□□□ -1.21
SUDS3-202ENST00000541280 MYBBP1AQ9BQG0 1328 aaKnown RBP7.48□□□□□ -1.21
SUDS3-202ENST00000541280 RREB1Q92766 1687 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 H0Y8X5 98 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 CBFA2T2O43439 604 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 CYP19A1P11511 503 aaPredicted RBP7.47□□□□□ -1.21
SUDS3-202ENST00000541280 VIPR1P32241 457 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 ARL4AP40617 200 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 GIPRP48546 466 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 TGFB2P61812 414 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 SRSF3P84103 164 aaKnown RBP7.47□□□□□ -1.21
SUDS3-202ENST00000541280 LMOD3Q0VAK6 560 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 CBX2Q14781 532 aaPredicted RBP7.47□□□□□ -1.21
SUDS3-202ENST00000541280 TAF7Q15545 349 aaPredicted RBP7.47□□□□□ -1.21
SUDS3-202ENST00000541280 GPR162Q16538 588 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 FBXW10Q5XX13 1052 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 OLFML2BQ68BL8 750 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 CWF19L1Q69YN2 538 aaKnown RBP7.47□□□□□ -1.21
SUDS3-202ENST00000541280 GPRASP2Q96D09 838 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 SGPP1Q9BX95 441 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 BABAM1Q9NWV8 329 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 KLHL14Q9P2G3 628 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 ZNF451Q9Y4E5 1061 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 LTBP3Q9NS15 1303 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 MAPK8IP3Q9UPT6 1336 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 ANKRD26Q9UPS8 1709 aa7.47□□□□□ -1.21
SUDS3-202ENST00000541280 CEMIPQ8WUJ3 1361 aa7.46□□□□□ -1.21
SUDS3-202ENST00000541280 WNK3Q9BYP7 1800 aa7.46□□□□□ -1.21
SUDS3-202ENST00000541280 FGF10O15520 208 aaPredicted RBP7.46□□□□□ -1.22
SUDS3-202ENST00000541280 MPOP05164 745 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 SNRPA1P09661 255 aaKnown RBP7.46□□□□□ -1.22
SUDS3-202ENST00000541280 HDLBPQ00341 1268 aaKnown RBP7.46□□□□□ -1.22
SUDS3-202ENST00000541280 SLC39A6Q13433 755 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 KIR3DS1Q14943 382 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 NFE2L2Q16236 605 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 CYP2R1Q6VVX0 501 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 TTLL10Q6ZVT0 673 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 HOMEZQ8IX15 550 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 DNAJC10Q8IXB1 793 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 JMJD8Q96S16 334 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 PLEKHF1Q96S99 279 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 CNTD2Q9H8S5 307 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 CNOT6Q9ULM6 557 aaKnown RBP7.46□□□□□ -1.22
SUDS3-202ENST00000541280 EFR3BQ9Y2G0 817 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 NUP188Q5SRE5 1749 aa7.46□□□□□ -1.22
SUDS3-202ENST00000541280 COL3A1P02461 1466 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 IRS4O14654 1257 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 N4BP3O15049 544 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 MMP10P09238 476 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 GSTM1P09488 218 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 ITGA4P13612 1032 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 GYS1P13807 737 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 PRKCAP17252 672 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 YY1P25490 414 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 IL6STP40189 918 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 EIF6P56537 245 aaKnown RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 TMEM62Q0P6H9 643 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 WDR43Q15061 677 aaKnown RBP eCLIP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 ZNF385BQ569K4 471 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 NOL9Q5SY16 702 aaKnown RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 HLA-DQA1Q5Y7H0 255 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 CCDC81Q6ZN84 652 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 FIBCD1Q8N539 461 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 MRRFQ96E11 262 aaKnown RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 ZNF496Q96IT1 587 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 SIGLEC10Q96LC7 697 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 PHAXQ9H814 394 aaKnown RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 PRKRIP1Q9H875 184 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 IMPACTQ9P2X3 320 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 NARFQ9UHQ1 456 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 SF3B6Q9Y3B4 125 aaKnown RBP7.45□□□□□ -1.22
SUDS3-202ENST00000541280 KCTD3Q9Y597 815 aa7.45□□□□□ -1.22
SUDS3-202ENST00000541280 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 RFXAPO00287 272 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 NOP2P46087 812 aaKnown RBP7.44□□□□□ -1.22
SUDS3-202ENST00000541280 EIF5P55010 431 aaKnown RBP7.44□□□□□ -1.22
SUDS3-202ENST00000541280 CYP4F8P98187 520 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 NT5DC4Q86YG4 428 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 NUP43Q8NFH3 380 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 CRBNQ96SW2 442 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 IRF2BPLQ9H1B7 796 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 SIRT5Q9NXA8 310 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 WHRNQ9P202 907 aa7.44□□□□□ -1.22
SUDS3-202ENST00000541280 DIS3Q9Y2L1 958 aaKnown RBP7.44□□□□□ -1.22
SUDS3-202ENST00000541280 SOS1Q07889 1333 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms