RNA–Protein interactions for RNA: ENST00000541042.5

C1R-208, Transcript of complement C1r, human

TSL 5

Gene C1R, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1R-208	ENST00000541042	MROH7	Q68CQ1	1323 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	RBAK-RBAKDN	I3L0D1	243 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	DDX39A	O00148	427 aa	Known RBP	11.65	□□□□□ -0.54
C1R-208	ENST00000541042	SLC37A4	O43826	429 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	CYP2C9	P11712	490 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	TCF7	P36402	384 aa	Predicted RBP	11.65	□□□□□ -0.54
C1R-208	ENST00000541042	ACTR2	P61160	394 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	MDM2	Q00987	491 aa	Predicted RBP	11.65	□□□□□ -0.54
C1R-208	ENST00000541042	LETM2	Q2VYF4	491 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	FAM47C	Q5HY64	1035 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	GDF6	Q6KF10	455 aa	Predicted RBP	11.65	□□□□□ -0.54
C1R-208	ENST00000541042	ABHD15	Q6UXT9	468 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	NEK8	Q86SG6	692 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	SESTD1	Q86VW0	696 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	SLC5A5	Q92911	643 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	BAD	Q92934	168 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	SDF4	Q9BRK5	362 aa		11.65	□□□□□ -0.54
C1R-208	ENST00000541042	COLQ	Q9Y215	455 aa	Predicted RBP	11.65	□□□□□ -0.54
C1R-208	ENST00000541042	UMODL1	Q5DID0	1318 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	DOCK5	Q9H7D0	1870 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	IGKV6D-21	A0A0A0MT36	114 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	KIF28P	B7ZC32	967 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	LGR5	O75473	907 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	TIMP1	P01033	207 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	SET	Q01105	290 aa	Predicted RBP	11.64	□□□□□ -0.55
C1R-208	ENST00000541042	PTPN11	Q06124	597 aa	Predicted RBP	11.64	□□□□□ -0.55
C1R-208	ENST00000541042	TRIM29	Q14134	588 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	PPP4R3A	Q6IN85	833 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	MOXD1	Q6UVY6	613 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	CHRDL2	Q6WN34	429 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	FAM184A	Q8NB25	1140 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	ETNPPL	Q8TBG4	499 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	TBC1D22B	Q9NU19	505 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	GTF2IRD1	Q9UHL9	959 aa		11.64	□□□□□ -0.55
C1R-208	ENST00000541042	TLR3	O15455	904 aa	Known RBP	11.63	□□□□□ -0.55
C1R-208	ENST00000541042	PSMD10	O75832	226 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	SMIM10L2A	P0DMW4	78 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	SMIM10L2B	P0DMW5	78 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	GJB2	P29033	226 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	HOXC8	P31273	242 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	CYP2C18	P33260	490 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	BMP8B	P34820	402 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	EPHB4	P54760	987 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	B3GNT9	Q6UX72	402 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	C7orf31	Q8N865	590 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	DHX38	Q92620	1227 aa	Known RBP	11.63	□□□□□ -0.55
C1R-208	ENST00000541042	HAS1	Q92839	578 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	WNT8B	Q93098	351 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	VWCE	Q96DN2	955 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	RIT2	Q99578	217 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	NOC4L	Q9BVI4	516 aa	Known RBP	11.63	□□□□□ -0.55
C1R-208	ENST00000541042	KATNAL1	Q9BW62	490 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	FOXP1	Q9H334	677 aa	Predicted RBP	11.63	□□□□□ -0.55
C1R-208	ENST00000541042	SMARCAD1	Q9H4L7	1026 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	BRMS1	Q9HCU9	246 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	KCNMB3	Q9NPA1	279 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	PRKAG2	Q9UGJ0	569 aa		11.63	□□□□□ -0.55
C1R-208	ENST00000541042	DDX25	Q9UHL0	483 aa	Known RBP	11.63	□□□□□ -0.55
C1R-208	ENST00000541042	TRIOBP	Q9H2D6	2365 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	CCNT1	O60563	726 aa	Known RBP	11.62	□□□□□ -0.55
C1R-208	ENST00000541042	SUPT20HL2	P0C7V6	817 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	RAG1	P15918	1043 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	ATP4A	P20648	1035 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	MARK3	P27448	753 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	STAT5B	P51692	787 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	ADAM17	P78536	824 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	PTGIS	Q16647	500 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.62	□□□□□ -0.55
C1R-208	ENST00000541042	SWSAP1	Q6NVH7	229 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	C16orf59	Q7L2K0	433 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	PLPPR4	Q7Z2D5	763 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.62	□□□□□ -0.55
C1R-208	ENST00000541042	GLG1	Q92896	1179 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	SNX21	Q969T3	373 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	PPP1R12C	Q9BZL4	782 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	WNT8A	Q9H1J5	351 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	UNC45A	Q9H3U1	944 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	HIPK3	Q9H422	1215 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	SETD4	Q9NVD3	440 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	SMC3	Q9UQE7	1217 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	LAMA2	P24043	3122 aa	Known RBP	11.62	□□□□□ -0.55
C1R-208	ENST00000541042	LAMA3	Q16787	3333 aa		11.62	□□□□□ -0.55
C1R-208	ENST00000541042	EMSY	Q7Z589	1322 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	EML1	O00423	815 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	TREH	O43280	583 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	GAS7	O60861	476 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	GCFC2	P16383	781 aa	Known RBP	11.61	□□□□□ -0.55
C1R-208	ENST00000541042	ATP2B1	P20020	1258 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	U2AF2	P26368	475 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
C1R-208	ENST00000541042	TOB1	P50616	345 aa	Predicted RBP	11.61	□□□□□ -0.55
C1R-208	ENST00000541042	KRT76	Q01546	638 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	GPNMB	Q14956	572 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	PLCB4	Q15147	1175 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	SAFB	Q15424	915 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
C1R-208	ENST00000541042	TRIM71	Q2Q1W2	868 aa	Known RBP	11.61	□□□□□ -0.55
C1R-208	ENST00000541042	MARCH8	Q5T0T0	291 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	LRCH2	Q5VUJ6	765 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	MFSD5	Q6N075	450 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	POTED	Q86YR6	584 aa		11.61	□□□□□ -0.55
C1R-208	ENST00000541042	AFAP1L1	Q8TED9	768 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms