RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 TXKP42681 527 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 PSMC4P43686 418 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 PDIA5Q14554 519 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 RASSF8Q8NHQ8 419 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 SOCS4Q8WXH5 440 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 GJA10Q969M2 543 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 WDR11Q9BZH6 1224 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 KATNBL1Q9H079 304 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 JADE2Q9NQC1 790 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 RMND1Q9NWS8 449 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMAD3-204ENST00000540846 TBX3O15119 743 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 STAM2O75886 525 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 FCGRTP55899 365 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 MAP2K1Q02750 393 aaPredicted RBP13.97□□□□□ -0.17
SMAD3-204ENST00000540846 SPIRE1Q08AE8 756 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 CUL4BQ13620 913 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 ENOX1Q8TC92 643 aaKnown RBP13.97□□□□□ -0.17
SMAD3-204ENST00000540846 LRRC15Q8TF66 581 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 STAMQ92783 540 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 KCNH7Q9NS40 1196 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 LRWD1Q9UFC0 647 aa13.97□□□□□ -0.17
SMAD3-204ENST00000540846 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
SMAD3-204ENST00000540846 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
SMAD3-204ENST00000540846 ZNF76P36508 570 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-204ENST00000540846 STXBP2Q15833 593 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 B3GNT9Q6UX72 402 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 ARMCX2Q7L311 632 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 SPC24Q8NBT2 197 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 SLC5A5Q92911 643 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 GPRASP2Q96D09 838 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 CALML4Q96GE6 196 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 APBA2Q99767 749 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 NUDT12Q9BQG2 462 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 BLZF1Q9H2G9 400 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 TTC12Q9H892 705 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-204ENST00000540846 FLRT1Q9NZU1 646 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 STK17AQ9UEE5 414 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 GABRQQ9UN88 632 aa13.96□□□□□ -0.17
SMAD3-204ENST00000540846 DHX15O43143 795 aaKnown RBP13.96□□□□□ -0.18
SMAD3-204ENST00000540846 SLC26A4O43511 780 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 PSMD10O75832 226 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 SNAI1O95863 264 aaPredicted RBP13.96□□□□□ -0.18
SMAD3-204ENST00000540846 RPN1P04843 607 aaKnown RBP13.96□□□□□ -0.18
SMAD3-204ENST00000540846 ICAM3P32942 547 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 CLCN1P35523 988 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 PDE4DQ08499 809 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 GRB10Q13322 594 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 ITGB3BPQ13352 177 aaPredicted RBP13.96□□□□□ -0.18
SMAD3-204ENST00000540846 MTMR1Q13613 665 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 KCNB1Q14721 858 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 CCL14Q16627 93 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 DPP9Q86TI2 863 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 CD99L2Q8TCZ2 262 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF296Q8WUU4 475 aaPredicted RBP13.96□□□□□ -0.18
SMAD3-204ENST00000540846 FAM20AQ96MK3 541 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 UIMC1Q96RL1 719 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 AGO4Q9HCK5 861 aaKnown RBP13.96□□□□□ -0.18
SMAD3-204ENST00000540846 VAV3Q9UKW4 847 aa13.96□□□□□ -0.18
SMAD3-204ENST00000540846 SYNGAP1Q96PV0 1343 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 SYNRGQ9UMZ2 1314 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 POTEMA6NI47 508 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 ASB14A6NK59 587 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 SPATA31C2B4DYI2 1134 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 ATP9AO75110 1047 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 CD44P16070 742 aaKnown RBP13.95□□□□□ -0.18
SMAD3-204ENST00000540846 KCNA2P16389 499 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF18P17022 549 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 RGS2P41220 211 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 PRKCZQ05513 592 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 TMEM119Q4V9L6 283 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 DRC7Q8IY82 874 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 MSL3Q8N5Y2 521 aaKnown RBP13.95□□□□□ -0.18
SMAD3-204ENST00000540846 PNMA5Q96PV4 448 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 MED15Q96RN5 788 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 TINF2Q9BSI4 451 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
SMAD3-204ENST00000540846 CENPFP49454 3210 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 IPO5O00410 1097 aaKnown RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 KLRC4O43908 158 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF500O60304 480 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 FKTNO75072 461 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 XRCC5P13010 732 aaKnown RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 ATP1A3P13637 1013 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 FLT3LGP49771 235 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 FANCCQ00597 558 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 SP2Q02086 613 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 ZNF658Q5TYW1 1059 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 KRT79Q5XKE5 535 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 OLFML2BQ68BL8 750 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 FBXO16Q8IX29 292 aaPredicted RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 SLFN12Q8IYM2 578 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 PLIN2Q99541 437 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 XPO4Q9C0E2 1151 aaKnown RBP13.94□□□□□ -0.18
SMAD3-204ENST00000540846 BLOC1S4Q9NUP1 217 aa13.94□□□□□ -0.18
SMAD3-204ENST00000540846 FANCLQ9NW38 375 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms