RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MIS18BP1Q6P0N0 1132 aa17.5■□□□□ 0.39
DDB1-218ENST00000540784 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
DDB1-218ENST00000540784 HTATIP2Q9BUP3 242 aa17.5■□□□□ 0.39
DDB1-218ENST00000540784 PCDHA12Q9UN75 941 aa17.5■□□□□ 0.39
DDB1-218ENST00000540784 SAMM50Q9Y512 469 aa17.5■□□□□ 0.39
DDB1-218ENST00000540784 PCDHB6Q9Y5E3 794 aa17.5■□□□□ 0.39
DDB1-218ENST00000540784 H3BRB1 525 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 LGALS2P05162 132 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 ZNF286BP0CG31 522 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 TXKP42681 527 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 RESTQ13127 1097 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 ITGA7Q13683 1181 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 NBR1Q14596 966 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 ABHD15Q6UXT9 468 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 SMAP1Q8IYB5 467 aaPredicted RBP17.49■□□□□ 0.39
DDB1-218ENST00000540784 KAT2BQ92831 832 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 GLG1Q92896 1179 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 C16orf70Q9BSU1 422 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 KATNAL1Q9BW62 490 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 SEZ6LQ9BYH1 1024 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 TMEM60Q9H2L4 133 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 UNC45AQ9H3U1 944 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 TUT1Q9H6E5 874 aaKnown RBP17.49■□□□□ 0.39
DDB1-218ENST00000540784 AZI2Q9H6S1 392 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 PCDHA10Q9Y5I2 948 aa17.49■□□□□ 0.39
DDB1-218ENST00000540784 A0A0U1RQG5 324 aaPredicted RBP17.48■□□□□ 0.39
DDB1-218ENST00000540784 WDR64B1ANS9 1081 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 ARVCFO00192 962 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 BACH1O14867 736 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 CHMP2AO43633 222 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 PSAPP07602 524 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 SUPT20HL2P0C7V6 817 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 ZSCAN22P10073 491 aaPredicted RBP17.48■□□□□ 0.39
DDB1-218ENST00000540784 SFNP31947 248 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 PSEN2P49810 448 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 PTGDRQ13258 359 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 NBPF20Q3BBV1 942 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 FOXD4L5Q5VV16 416 aaPredicted RBP17.48■□□□□ 0.39
DDB1-218ENST00000540784 SWSAP1Q6NVH7 229 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 FOXD4L4Q8WXT5 416 aaPredicted RBP17.48■□□□□ 0.39
DDB1-218ENST00000540784 TTC12Q9H892 705 aaPredicted RBP17.48■□□□□ 0.39
DDB1-218ENST00000540784 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.48■□□□□ 0.39
DDB1-218ENST00000540784 DISC1Q9NRI5 854 aa17.48■□□□□ 0.39
DDB1-218ENST00000540784 GRIN2DO15399 1336 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 LGR5O75473 907 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 F2P00734 622 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 OR52Z1P0C646 297 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 CDK7P50613 346 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 STAT5BP51692 787 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 JAK3P52333 1124 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 PPP2R5CQ13362 524 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 MFSD10Q14728 455 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 KIAA0753Q2KHM9 967 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 C1orf53Q5VUE5 145 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 FAM160B1Q5W0V3 765 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 PLPPR4Q7Z2D5 763 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 MIER3Q7Z3K6 550 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 C4orf32Q8N8J7 132 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 RDM1Q8NG50 284 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 DPF3Q92784 378 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 ERAP1Q9NZ08 941 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
DDB1-218ENST00000540784 FRMPD3Q5JV73 1810 aa17.47■□□□□ 0.39
DDB1-218ENST00000540784 BRCA2P51587 3418 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 IGKV6D-21A0A0A0MT36 114 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 HAS3O00219 553 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 LAD1O00515 517 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 FAM47CQ5HY64 1035 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 FAM173BQ6P4H8 233 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 NFRKBQ6P4R8 1299 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 B3GNT9Q6UX72 402 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 C7orf31Q8N865 590 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 PCYT2Q99447 389 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 ZNF302Q9NR11 478 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 ATP11BQ9Y2G3 1177 aa17.46■□□□□ 0.39
DDB1-218ENST00000540784 TECP42680 631 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 SLC26A2P50443 739 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 RTP1P59025 263 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 PTPN11Q06124 597 aaPredicted RBP17.45■□□□□ 0.38
DDB1-218ENST00000540784 PKP1Q13835 747 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 SNX17Q15036 470 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 NCAPH2Q6IBW4 605 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 PDXDC2PQ6P474 469 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 TNPO1Q92973 898 aaKnown RBP17.45■□□□□ 0.38
DDB1-218ENST00000540784 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 GABBR1Q9UBS5 961 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 CEP131Q9UPN4 1083 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 RBM19Q9Y4C8 960 aaKnown RBP17.45■□□□□ 0.38
DDB1-218ENST00000540784 EMSYQ7Z589 1322 aa17.45■□□□□ 0.38
DDB1-218ENST00000540784 DCDC2CA8MYV0 355 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 EML1O00423 815 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 EVI5O60447 810 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 PQBP1O60828 265 aaKnown RBP17.44■□□□□ 0.38
DDB1-218ENST00000540784 BMP15O95972 392 aa17.44■□□□□ 0.38
DDB1-218ENST00000540784 F13A1P00488 732 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms