RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 LAMB2P55268 1798 aa11.31□□□□□ -0.6
GPD2-213ENST00000540309 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 MINDY4BA8MYZ0 360 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 F8VZ95 297 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 BUB1BO60566 1050 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 WFS1O76024 890 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 KLRC1P26715 233 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 SKIV2L2P42285 1042 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 TEX9Q8N6V9 391 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 NAP1L3Q99457 506 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 SMARCAL1Q9NZC9 954 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 SAMD15Q9P1V8 674 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 NOVA2Q9UNW9 492 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 UTP11Q9Y3A2 253 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 DCCP43146 1447 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 E7ENQ6 273 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 O00370 1275 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 BUB1O43683 1085 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 FLOT1O75955 427 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 AGTP01019 485 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 CYP7A1P22680 504 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 MAGOHP61326 146 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 PDIA5Q14554 519 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 PPP2R5AQ15172 486 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 TDRD12Q587J7 1177 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 ZC3H3Q8IXZ2 948 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 MAGOHBQ96A72 148 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 PSMB7Q99436 277 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 HINFPQ9BQA5 517 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.3□□□□□ -0.6
GPD2-213ENST00000540309 BARHL2Q9NY43 387 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 COL4A3BPQ9Y5P4 624 aa11.3□□□□□ -0.6
GPD2-213ENST00000540309 BAZ2AQ9UIF9 1905 aaKnown RBP11.3□□□□□ -0.6
GPD2-213ENST00000540309 KIAA1551Q9HCM1 1747 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 FAM187AA6NFU0 413 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 TLR2O60603 784 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 NOL4O94818 638 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 PAX7P23759 505 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 PRKCIP41743 596 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■□□□□ 10.3
GPD2-213ENST00000540309 PDE6CP51160 858 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 NAA25Q14CX7 972 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 PPP1R7Q15435 360 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 KRT71Q3SY84 523 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 ZCWPW2Q504Y3 356 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 C6orf118Q5T5N4 469 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 TRPM8Q7Z2W7 1104 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 SAAL1Q96ER3 474 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 ACSBG1Q96GR2 724 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 IFT74Q96LB3 600 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 RAB34Q9BZG1 259 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 ZMYND12Q9H0C1 365 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 TMEM60Q9H2L4 133 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 CNOT8Q9UFF9 292 aaKnown RBP11.29□□□□□ -0.6
GPD2-213ENST00000540309 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
GPD2-213ENST00000540309 FCER1AP12319 257 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 TMOD1P28289 359 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 POU5F1Q01860 360 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 ADCY2Q08462 1091 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 GRM4Q14833 912 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 TXNRD1Q16881 649 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 SPRED3Q2MJR0 410 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 TNFAIP8L3Q5GJ75 292 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 ZNF483Q8TF39 744 aaPredicted RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 ATXN2LQ8WWM7 1075 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 PABPC3Q9H361 631 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 ARPP21Q9UBL0 812 aaPredicted RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 CTNNAL1Q9UBT7 734 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 hCG_1984214I3L0E3 225 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 KCNK3O14649 394 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 ANP32DO95626 131 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 HSPA6P17066 643 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 GNA11P29992 359 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 MRPS25P82663 173 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 DHX34Q14147 1143 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 GALNTL6Q49A17 601 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 BZW1Q7L1Q6 419 aaKnown RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 EGFL6Q8IUX8 553 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
GPD2-213ENST00000540309 ZNF713Q8N859 430 aaPredicted RBP11.28□□□□□ -0.6
GPD2-213ENST00000540309 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms