RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ARHGAP4P98171 946 aa23.05■■□□□ 1.28
LPCAT3-210ENST00000540090 UTP14CQ5TAP6 766 aaKnown RBP23.05■■□□□ 1.28
LPCAT3-210ENST00000540090 EP400NLQ6ZTU2 488 aa23.05■■□□□ 1.28
LPCAT3-210ENST00000540090 LINC00271P0C7V0 271 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 BMPR1AP36894 532 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 CTC1Q2NKJ3 1217 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 UIMC1Q96RL1 719 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 LMAN2LQ9H0V9 348 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 EHMT1Q9H9B1 1298 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 CLDND1Q9NY35 253 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 MYO7AQ13402 2215 aa23.04■■□□□ 1.28
LPCAT3-210ENST00000540090 BAZ2BQ9UIF8 2168 aaKnown RBP23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 ERICH2A1L162 156 aa23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 CSPP1Q1MSJ5 1256 aa23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 XRRA1Q6P2D8 792 aa23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 ADHFE1Q8IWW8 467 aa23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 U3KPZ7 1027 aaPredicted RBP23.03■■□□□ 1.28
LPCAT3-210ENST00000540090 ENPP3O14638 875 aa23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 CYP21A2P08686 494 aa23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 CTNNB1P35222 781 aa23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 WTAPQ15007 396 aa23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 PCNX4Q63HM2 1172 aa23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 TAF2Q6P1X5 1199 aa23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 ALYREFQ86V81 257 aaKnown RBP23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 CLP1Q92989 425 aaKnown RBP23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 C11orf84Q9BUA3 381 aaPredicted RBP23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 RC3H2Q9HBD1 1191 aaKnown RBP23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 SUPT16HQ9Y5B9 1047 aaKnown RBP23.02■■□□□ 1.28
LPCAT3-210ENST00000540090 PIK3CDO00329 1044 aa23.01■■□□□ 1.27
LPCAT3-210ENST00000540090 GRM6O15303 877 aa23.01■■□□□ 1.27
LPCAT3-210ENST00000540090 GHRP10912 638 aa23.01■■□□□ 1.27
LPCAT3-210ENST00000540090 MGAT3Q09327 533 aa23.01■■□□□ 1.27
LPCAT3-210ENST00000540090 USP17L6PQ6QN14 398 aa23.01■■□□□ 1.27
LPCAT3-210ENST00000540090 GIMAP8Q8ND71 665 aaPredicted RBP23.01■■□□□ 1.27
LPCAT3-210ENST00000540090 MEIS2O14770 477 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 SP4Q02446 784 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 HYAL1Q12794 435 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 LPIN1Q14693 890 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 SMAD2Q15796 467 aaKnown RBP23■■□□□ 1.27
LPCAT3-210ENST00000540090 RUFY4Q6ZNE9 571 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 CATIPQ7Z7H3 387 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 NLRX1Q86UT6 975 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 SMARCC2Q8TAQ2 1214 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 PIBF1Q8WXW3 757 aa23■■□□□ 1.27
LPCAT3-210ENST00000540090 ZNF689Q96CS4 500 aaPredicted RBP23■■□□□ 1.27
LPCAT3-210ENST00000540090 UPF3BQ9BZI7 483 aaKnown RBP23■■□□□ 1.27
LPCAT3-210ENST00000540090 TCF7P36402 384 aaPredicted RBP22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 DLX2Q07687 328 aaPredicted RBP22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 SART3Q15020 963 aaKnown RBP22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 RALYLQ86SE5 291 aaKnown RBP22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 NCOA7Q8NI08 942 aa22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 IGDCC4Q8TDY8 1250 aa22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 CUL5Q93034 780 aa22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 KCNH6Q9H252 994 aa22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 ADGRA3Q8IWK6 1321 aa22.99■■□□□ 1.27
LPCAT3-210ENST00000540090 E7EWF7 191 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 ATP9AO75110 1047 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 SMARCA1P28370 1054 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 IRS1P35568 1242 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 PTH1RQ03431 593 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 PPFIA1Q13136 1202 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 RSPH3Q86UC2 560 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 SEPT1Q8WYJ6 367 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 MAP3K14Q99558 947 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 PLVAPQ9BX97 442 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 SPZ1Q9BXG8 430 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 TAF6LQ9Y6J9 622 aa22.98■■□□□ 1.27
LPCAT3-210ENST00000540090 GSTTP1A0A1W2PQM5 241 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 MBLAC1A4D2B0 266 aaPredicted RBP22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 MBTPS2O43462 519 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 DGKIO75912 1065 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 KCNA2P16389 499 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 BTG3Q14201 252 aaPredicted RBP22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 FBXO47Q5MNV8 452 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 GPRASP2Q96D09 838 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 RRP36Q96EU6 259 aaKnown RBP22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 CDHR1Q96JP9 859 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 ERAP1Q9NZ08 941 aa22.97■■□□□ 1.27
LPCAT3-210ENST00000540090 CAMK1Q14012 370 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 GRIK4Q16099 956 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 MARCH8Q5T0T0 291 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 DNAJB3Q8WWF6 145 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 RUFY2Q8WXA3 655 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 FBXL18Q96ME1 805 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 POP1Q99575 1024 aaKnown RBP22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 TUBE1Q9UJT0 475 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 C5orf42Q9H799 3197 aa22.96■■□□□ 1.27
LPCAT3-210ENST00000540090 MMP1P03956 469 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 GSPT1P15170 499 aaKnown RBP22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 ANTXR2P58335 489 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 CLUL1Q15846 466 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 WDFY4Q6ZS81 3184 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 TSHZ1Q6ZSZ6 1077 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 CRIPAKQ8N1N5 446 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 PLAGL2Q9UPG8 496 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 CDY2AQ9Y6F7 541 aa22.95■■□□□ 1.26
LPCAT3-210ENST00000540090 RALGAPA2Q2PPJ7 1873 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 ITGB5P18084 799 aa22.94■■□□□ 1.26
LPCAT3-210ENST00000540090 MARK3P27448 753 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms