RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 PLVAPQ9BX97 442 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 BRPF3Q9ULD4 1205 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 MRPL11Q9Y3B7 192 aaKnown RBP6.93□□□□□ -1.3
CPSF7-219ENST00000539952 TRANK1O15050 2925 aa6.93□□□□□ -1.3
CPSF7-219ENST00000539952 CHD8Q9HCK8 2581 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 MYH4Q9Y623 1939 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 DDX11L8A8MPP1 907 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 LOC730098B7Z3J9 87 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 H3BRB1 525 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 SMARCA5O60264 1052 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 GFRA3O60609 400 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 NR3C2P08235 984 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 SNHG28P0DPA3 235 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 HSPD1P10809 573 aaKnown RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 PCP11498 1178 aaKnown RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 HOXD8P13378 290 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 AVPR2P30518 371 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 NT5C2P49902 561 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 ZNF200P98182 395 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 ZNF543Q08ER8 600 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 HYAL1Q12794 435 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 TCF15Q12870 199 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 HDAC1Q13547 482 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 CBX2Q14781 532 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 CCDC178Q5BJE1 867 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 CELF3Q5SZQ8 465 aaKnown RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 SYTL5Q8TDW5 730 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 TBC1D5Q92609 795 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 P2RX5Q93086 422 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 SEC62Q99442 399 aaKnown RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 USP26Q9BXU7 913 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 IFIH1Q9BYX4 1025 aaKnown RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 RNPEPQ9H4A4 650 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 IGFLR1Q9H665 355 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 TUT1Q9H6E5 874 aaKnown RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 DCTPP1Q9H773 170 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 INCENPQ9NQS7 918 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 TOMM22Q9NS69 142 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 ABCB11O95342 1321 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 FRMPD2Q68DX3 1309 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-219ENST00000539952 MYO7AQ13402 2215 aa6.92□□□□□ -1.3
CPSF7-219ENST00000539952 ZNF318Q5VUA4 2279 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-219ENST00000539952 PROB1E7EW31 1015 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 MCM4P33991 863 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 CTNNB1P35222 781 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 NDUFV1P49821 464 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 DLX2Q07687 328 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-219ENST00000539952 SIGLEC14Q08ET2 396 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 COASYQ13057 564 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 CLUL1Q15846 466 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 USH1GQ495M9 461 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 FAM26DQ5JW98 314 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 FAM43BQ6ZT52 329 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-219ENST00000539952 ERMP1Q7Z2K6 904 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 DGKHQ86XP1 1220 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 TICAM2Q86XR7 235 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 ANKS1AQ92625 1134 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
CPSF7-219ENST00000539952 WNT8BQ93098 351 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 SNX21Q969T3 373 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 SPATA33Q96N06 139 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 C16orf70Q9BSU1 422 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 FSD1Q9BTV5 496 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 C22orf23Q9BZE7 217 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 MLXIPQ9HAP2 919 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-219ENST00000539952 PLAGL2Q9UPG8 496 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 TTC41PQ6P2S7 1318 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 REV3LO60673 3130 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 TECTAO75443 2155 aa6.91□□□□□ -1.3
CPSF7-219ENST00000539952 FSD2A1L4K1 749 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 ENPP3O14638 875 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 GRM6O15303 877 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 TREHO43280 583 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 FGAP02671 866 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 MMP1P03956 469 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 ATF7P17544 494 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-219ENST00000539952 HOXC8P31273 242 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 CLCN1P35523 988 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 TRAF1Q13077 416 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 BTG3Q14201 252 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-219ENST00000539952 HIC1Q14526 733 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 HSDL1Q3SXM5 330 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 RRP12Q5JTH9 1297 aaKnown RBP6.9□□□□□ -1.3
CPSF7-219ENST00000539952 MFSD6Q6ZSS7 791 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 STOX1Q6ZVD7 989 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 RASGRP2Q7LDG7 609 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 RSPH3Q86UC2 560 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 HSCBQ8IWL3 235 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 EFHBQ8N7U6 833 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 MSLNLQ96KJ4 702 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 PHF7Q9BWX1 381 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-219ENST00000539952 UBA5Q9GZZ9 404 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 PXMP2Q9NR77 195 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 HELLSQ9NRZ9 838 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 LHX6Q9UPM6 363 aa6.9□□□□□ -1.3
CPSF7-219ENST00000539952 GGPS1O95749 300 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms