RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SYNRGQ9UMZ2 1314 aa18.83■□□□□ 0.61
COPS3-212ENST00000539941 POTEFA5A3E0 1075 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 GOLGA6L6A8MZA4 724 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 GTF2F1P35269 517 aaKnown RBP eCLIP18.82■□□□□ 0.6
COPS3-212ENST00000539941 GTF2A2P52657 109 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 PDE4DQ08499 809 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 DHX8Q14562 1220 aaKnown RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 COL13A1Q5TAT6 717 aaPredicted RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 POTEGQ6S5H5 508 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 SAPCD2Q86UD0 394 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 UNC45AQ9H3U1 944 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 NFE2L3Q9Y4A8 694 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 E9PMD0 336 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 DHX15O43143 795 aaKnown RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 CNMDO75829 334 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 PTMAP06454 111 aaKnown RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 PAK1Q13153 545 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 PSMD2Q13200 908 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 SMYD4Q8IYR2 804 aaPredicted RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 ANKRD35Q8N283 1001 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 DDX12PQ92771 950 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 ZFP91Q96JP5 570 aaPredicted RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 CDHR1Q96JP9 859 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 INPP4AQ96PE3 977 aaPredicted RBP18.82■□□□□ 0.6
COPS3-212ENST00000539941 FANCLQ9NW38 375 aa18.82■□□□□ 0.6
COPS3-212ENST00000539941 TRPM7Q96QT4 1865 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 ZNF18P17022 549 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 PRCPP42785 496 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 SLC12A3P55017 1021 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 KLHL10Q6JEL2 608 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 SYT2Q8N9I0 419 aaPredicted RBP18.81■□□□□ 0.6
COPS3-212ENST00000539941 DHTKD1Q96HY7 919 aaPredicted RBP18.81■□□□□ 0.6
COPS3-212ENST00000539941 PURBQ96QR8 312 aaKnown RBP18.81■□□□□ 0.6
COPS3-212ENST00000539941 MED15Q96RN5 788 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 PAGR1Q9BTK6 254 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 MOV10L1Q9BXT6 1211 aaKnown RBP18.81■□□□□ 0.6
COPS3-212ENST00000539941 GDAQ9Y2T3 454 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 LCTP09848 1927 aa18.81■□□□□ 0.6
COPS3-212ENST00000539941 PSMA7O14818 248 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 CBFA2T2O43439 604 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 SLITRK3O94933 977 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 EYA4O95677 639 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 TPM3P06753 285 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 ZBTB48P10074 688 aaPredicted RBP18.8■□□□□ 0.6
COPS3-212ENST00000539941 FANCCQ00597 558 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 CYP4F22Q6NT55 531 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 GPBP1Q86WP2 473 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 TRMT44Q8IYL2 757 aaKnown RBP18.8■□□□□ 0.6
COPS3-212ENST00000539941 DNAJC19Q96DA6 116 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 WBP1LQ9NX94 342 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 ADD3Q9UEY8 706 aaKnown RBP18.8■□□□□ 0.6
COPS3-212ENST00000539941 CTNND2Q9UQB3 1225 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 LOXHD1Q8IVV2 1947 aa18.8■□□□□ 0.6
COPS3-212ENST00000539941 TESPA1A2RU30 521 aaPredicted RBP18.79■□□□□ 0.6
COPS3-212ENST00000539941 CHMP2AO43633 222 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 SSBP05455 408 aaKnown RBP eCLIP18.79■□□□□ 0.6
COPS3-212ENST00000539941 CYP11B2P19099 503 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 EHHADHQ08426 723 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 ITGB3BPQ13352 177 aaPredicted RBP18.79■□□□□ 0.6
COPS3-212ENST00000539941 GNPTABQ3T906 1256 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 DYMQ7RTS9 669 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 MIER3Q7Z3K6 550 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 SHCBP1Q8NEM2 672 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 RDM1Q8NG50 284 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 NELFBQ8WX92 580 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 DYDC2Q96IM9 177 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 MS4A4AQ96JQ5 239 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 CAPNS2Q96L46 248 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.79■□□□□ 0.6
COPS3-212ENST00000539941 RGL1Q9NZL6 768 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 TCEAL9Q9UHQ7 104 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 ERCC3P19447 782 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 KRT76Q01546 638 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 CYP4A11Q02928 519 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 ANKRD23Q86SG2 305 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 CCDC65Q8IXS2 484 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 NACC1Q96RE7 527 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 MROH8Q9H579 483 aa18.79■□□□□ 0.6
COPS3-212ENST00000539941 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
COPS3-212ENST00000539941 CCL15-CCL14A0A0B4J2E2 113 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 B4DLN1 442 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 POTEB2H3BUK9 544 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 ATP1A3P13637 1013 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 SFNP31947 248 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 JAK3P52333 1124 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 CCL15Q16663 113 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 SPRYD7Q5W111 196 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 HHIPL1Q96JK4 782 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 IFNKQ9P0W0 207 aa18.78■□□□□ 0.6
COPS3-212ENST00000539941 NFASCO94856 1347 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 FRMD3A2A2Y4 597 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 SERPINC1P01008 464 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 P4HBP07237 508 aaKnown RBP18.77■□□□□ 0.6
COPS3-212ENST00000539941 IDEP14735 1019 aa18.77■□□□□ 0.6
COPS3-212ENST00000539941 STX17P56962 302 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms