RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SMARCAD1Q9H4L7 1026 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 AZI2Q9H6S1 392 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 PCDHA6Q9UN73 950 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 PCDHA8Q9Y5H6 950 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 LINC01553A4QN01 128 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 EPOPA6NHQ4 379 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 ZBTB43O43298 467 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 CDC45O75419 566 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 FOSP01100 380 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-211ENST00000539843 ERVK-21P61565 698 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 MBTPS1Q14703 1052 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 UBE2SQ16763 222 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 PTPROQ16827 1216 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 DHX32Q7L7V1 743 aaKnown RBP17.51■□□□□ 0.39
UBE3B-211ENST00000539843 GDPD5Q8WTR4 605 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 LMBR1Q8WVP7 490 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 IFIH1Q9BYX4 1025 aaKnown RBP17.51■□□□□ 0.39
UBE3B-211ENST00000539843 JPH1Q9HDC5 661 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-211ENST00000539843 PKD2L1Q9P0L9 805 aa17.51■□□□□ 0.39
UBE3B-211ENST00000539843 NAP1L2Q9ULW6 460 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-211ENST00000539843 TTC28Q96AY4 2481 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 TET1Q8NFU7 2136 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 CCDC196A0A1B0GTZ2 297 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 hCG_1642624A0A1W2PR95 340 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 KCNA2P16389 499 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 ADCY7P51828 1080 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 HIC1Q14526 733 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 APOA5Q6Q788 366 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 FBXO22Q8NEZ5 403 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 BCAS3Q9H6U6 928 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 JADE2Q9NQC1 790 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 UBIAD1Q9Y5Z9 338 aa17.5■□□□□ 0.39
UBE3B-211ENST00000539843 RRN3P2A6NIE6 340 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 GOLGA8AA7E2F4 631 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 GOLGA8BA8MQT2 603 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 M0QZ92 97 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 ITGB5P18084 799 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 ZNF76P36508 570 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 GRIK4Q16099 956 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBE3B-211ENST00000539843 TUBE1Q9UJT0 475 aa17.49■□□□□ 0.39
UBE3B-211ENST00000539843 UPP2O95045 317 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 MARK3P27448 753 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 RCAN1P53805 252 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 TFF2Q03403 129 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 AP3B2Q13367 1082 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 FAM26DQ5JW98 314 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 WWC2Q6AWC2 1192 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 RPAINQ86UA6 219 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 CCDC12Q8WUD4 166 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-211ENST00000539843 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 SLC9A2Q9UBY0 812 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 TCEAL9Q9UHQ7 104 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 TRPC6Q9Y210 931 aa17.48■□□□□ 0.39
UBE3B-211ENST00000539843 CNTNAP5Q8WYK1 1306 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 KLF18A0A0U1RQI7 1052 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 ATP9AO75110 1047 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
UBE3B-211ENST00000539843 TCTN1Q2MV58 587 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 TSGA10IPQ3SY00 556 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 KRT40Q6A162 431 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 MCTP2Q6DN12 878 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 TOP1MTQ969P6 601 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 MXRA8Q9BRK3 442 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 RWDD3Q9Y3V2 267 aa17.47■□□□□ 0.39
UBE3B-211ENST00000539843 SMCO2A6NFE2 343 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 LPXNO60711 386 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 IGBP1P78318 339 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 ADAM17P78536 824 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 TIGD5Q53EQ6 642 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 IER5Q5VY09 327 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 SP7Q8TDD2 431 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-211ENST00000539843 ANO3Q9BYT9 981 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 KCNH7Q9NS40 1196 aa17.46■□□□□ 0.39
UBE3B-211ENST00000539843 V9GY48 417 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-211ENST00000539843 NFASCO94856 1347 aa17.46■□□□□ 0.38
UBE3B-211ENST00000539843 PRRC2BQ5JSZ5 2229 aaKnown RBP17.45■□□□□ 0.38
UBE3B-211ENST00000539843 GSTTP1A0A1W2PQM5 241 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 GHRP10912 638 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 BMP1P13497 986 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 SLC26A2P50443 739 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 METAP2P50579 478 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBE3B-211ENST00000539843 KCNQ1P51787 676 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
UBE3B-211ENST00000539843 CEP55Q53EZ4 464 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 TCEANC2Q96MN5 208 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 C17orf80Q9BSJ5 609 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 BARHL2Q9NY43 387 aa17.45■□□□□ 0.38
UBE3B-211ENST00000539843 EYSQ5T1H1 3165 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 EXOSC10Q01780 885 aaKnown RBP17.44■□□□□ 0.38
UBE3B-211ENST00000539843 EPC2Q52LR7 807 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 FAM160B1Q5W0V3 765 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 TSHZ1Q6ZSZ6 1077 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 SPRED2Q7Z698 418 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 FIBCD1Q8N539 461 aa17.44■□□□□ 0.38
UBE3B-211ENST00000539843 DNAJB3Q8WWF6 145 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms