RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MIER3Q7Z3K6 550 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 LEO1Q8WVC0 666 aaPredicted RBP17.36■□□□□ 0.37
DDB1-216ENST00000539739 SEPT1Q8WYJ6 367 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 UNC45AQ9H3U1 944 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 PAK6Q9NQU5 681 aaPredicted RBP17.36■□□□□ 0.37
DDB1-216ENST00000539739 VAV3Q9UKW4 847 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 SAMM50Q9Y512 469 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 ELP1O95163 1332 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 C6orf222P0C671 652 aaPredicted RBP17.36■□□□□ 0.37
DDB1-216ENST00000539739 PTGS1P23219 599 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 LONP1P36776 959 aaKnown RBP17.36■□□□□ 0.37
DDB1-216ENST00000539739 ME1P48163 572 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 ACTR2P61160 394 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 NCAPH2Q6IBW4 605 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 MIS18BP1Q6P0N0 1132 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 RDM1Q8NG50 284 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 ERMNQ8TAM6 284 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 UPF3AQ9H1J1 476 aaKnown RBP17.36■□□□□ 0.37
DDB1-216ENST00000539739 DISC1Q9NRI5 854 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 LRWD1Q9UFC0 647 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 PCDHA10Q9Y5I2 948 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 SYNRGQ9UMZ2 1314 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 ZEB2O60315 1214 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 CCNE2O96020 404 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 PGK1P00558 417 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 SPIRE1Q08AE8 756 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 FSCN1Q16658 493 aaKnown RBP17.35■□□□□ 0.37
DDB1-216ENST00000539739 LHX8Q68G74 356 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 B3GNT9Q6UX72 402 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 RNF180Q86T96 592 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 AK8Q96MA6 479 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 DEFB118Q96PH6 123 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 GBP4Q96PP9 640 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 GPR20Q99678 358 aa17.35■□□□□ 0.37
DDB1-216ENST00000539739 FBXO2Q9UK22 296 aaPredicted RBP17.35■□□□□ 0.37
DDB1-216ENST00000539739 POTEMA6NI47 508 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 A6NJR5 290 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 CUTAO60888 179 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 PPFIA4O75335 1185 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 PSAPP07602 524 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 EPHA7Q15375 998 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 IL17AQ16552 155 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 DGKDQ16760 1214 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 ARRDC4Q8NCT1 418 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 TMEM106CQ9BVX2 250 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 GDPD2Q9HCC8 539 aa17.34■□□□□ 0.37
DDB1-216ENST00000539739 GSTTP1A0A1W2PQM5 241 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 BACH1O14867 736 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 ATG7O95352 703 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 MYCNP04198 464 aaPredicted RBP17.33■□□□□ 0.37
DDB1-216ENST00000539739 MMP3P08254 477 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 TCF7P36402 384 aaPredicted RBP17.33■□□□□ 0.37
DDB1-216ENST00000539739 NKX3-2P78367 333 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 GNASQ5JWF2 1037 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 CLEC17AQ6ZS10 378 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 CLIC6Q96NY7 704 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 AZI2Q9H6S1 392 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 PCDHA7Q9UN72 937 aa17.33■□□□□ 0.37
DDB1-216ENST00000539739 CENPFP49454 3210 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 EML1O00423 815 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 KPNA6O60684 536 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 ADAMTS4O75173 837 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 GJB1P08034 283 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 BEX3Q00994 111 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 FAM160B1Q5W0V3 765 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 KRT79Q5XKE5 535 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 HAUS3Q68CZ6 603 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 PCSK9Q8NBP7 692 aaKnown RBP17.32■□□□□ 0.36
DDB1-216ENST00000539739 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 TCHHQ07283 1943 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 POTEFA5A3E0 1075 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 GOLGA6L4A6NEF3 574 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 P4HBP07237 508 aaKnown RBP17.32■□□□□ 0.36
DDB1-216ENST00000539739 CST5P28325 142 aaPredicted RBP17.32■□□□□ 0.36
DDB1-216ENST00000539739 UBA7P41226 1012 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 GRIN1Q05586 938 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 LRRC41Q15345 812 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 UTP14CQ5TAP6 766 aaKnown RBP17.32■□□□□ 0.36
DDB1-216ENST00000539739 ZNF579Q8NAF0 562 aaKnown RBP17.32■□□□□ 0.36
DDB1-216ENST00000539739 KLHDC9Q8NEP7 349 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 NEK9Q8TD19 979 aa17.32■□□□□ 0.36
DDB1-216ENST00000539739 EIF2AK1Q9BQI3 630 aaKnown RBP17.32■□□□□ 0.36
DDB1-216ENST00000539739 DKC1O60832 514 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDB1-216ENST00000539739 SGPL1O95470 568 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 TFRCP02786 760 aaKnown RBP17.31■□□□□ 0.36
DDB1-216ENST00000539739 HOXD8P13378 290 aaPredicted RBP17.31■□□□□ 0.36
DDB1-216ENST00000539739 CAPN2P17655 700 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 TXLNAP40222 546 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 SWSAP1Q6NVH7 229 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 U2AF1L4Q8WU68 220 aaKnown RBP17.31■□□□□ 0.36
DDB1-216ENST00000539739 GLG1Q92896 1179 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 SMARCAD1Q9H4L7 1026 aa17.31■□□□□ 0.36
DDB1-216ENST00000539739 ZNF302Q9NR11 478 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms