RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 BYSLQ13895 437 aaKnown RBP19.28■□□□□ 0.68
RAB40C-205ENST00000539661 ZCWPW2Q504Y3 356 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 ATP6V0A4Q9HBG4 840 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 TPX2Q9ULW0 747 aaKnown RBP19.28■□□□□ 0.68
RAB40C-205ENST00000539661 PALM3A6NDB9 673 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-205ENST00000539661 MGRN1O60291 552 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 MARSP56192 900 aaKnown RBP19.28■□□□□ 0.68
RAB40C-205ENST00000539661 KLHL30Q0D2K2 578 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 SEPT2Q15019 361 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 FAM228AQ86W67 206 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 GPIHBP1Q8IV16 184 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 BANK1Q8NDB2 785 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 CCT6BQ92526 530 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 PNMA5Q96PV4 448 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 SLITRK6Q9H5Y7 841 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 HAUS2Q9NVX0 235 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 PGRMC1O00264 195 aaKnown RBP19.27■□□□□ 0.68
RAB40C-205ENST00000539661 RNASE9P60153 205 aaKnown RBP19.27■□□□□ 0.68
RAB40C-205ENST00000539661 MECOMQ03112 1051 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 CRYMQ14894 314 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 OR2W6PQ8NHA6 318 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 CDK5RAP3Q96JB5 506 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAB40C-205ENST00000539661 SPZ1Q9BXG8 430 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 FBXL5Q9UKA1 691 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 MAST2Q6P0Q8 1798 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 SART1O43290 800 aaKnown RBP19.27■□□□□ 0.68
RAB40C-205ENST00000539661 TMOD1P28289 359 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 NAPAP54920 295 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 EIF3BP55884 814 aaKnown RBP19.27■□□□□ 0.68
RAB40C-205ENST00000539661 ASIC2Q16515 512 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 SEC14L1Q92503 715 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 RAD54LQ92698 747 aa19.27■□□□□ 0.68
RAB40C-205ENST00000539661 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.68
RAB40C-205ENST00000539661 PDHBP11177 359 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 TMEM266Q2M3C6 531 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 CEP57Q86XR8 500 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 UBLCP1Q8WVY7 318 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-205ENST00000539661 MTMR9Q96QG7 549 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 RAB34Q9BZG1 259 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 CNOT8Q9UFF9 292 aaKnown RBP19.26■□□□□ 0.67
RAB40C-205ENST00000539661 NOVA2Q9UNW9 492 aaKnown RBP19.26■□□□□ 0.67
RAB40C-205ENST00000539661 NTSR2O95665 410 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 DRD4P21917 467 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 RAPGEF1Q13905 1077 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 SPRED3Q2MJR0 410 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 DYMQ7RTS9 669 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 CPLX4Q7Z7G2 160 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 MARCH10Q8NA82 808 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-205ENST00000539661 FAM84BQ96KN1 310 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-205ENST00000539661 BCCIPQ9P287 314 aaKnown RBP eCLIP19.26■□□□□ 0.67
RAB40C-205ENST00000539661 ADAMTS1Q9UHI8 967 aa19.26■□□□□ 0.67
RAB40C-205ENST00000539661 CEP104O60308 925 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 PDIA5Q14554 519 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 TMC3Q7Z5M5 1100 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 CCDC26Q8TAB7 109 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 HVCN1Q96D96 273 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 PSMD1Q99460 953 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 PACSIN1Q9BY11 444 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 FAM114A2Q9NRY5 505 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 BZW2Q9Y6E2 419 aaKnown RBP19.25■□□□□ 0.67
RAB40C-205ENST00000539661 SMCO2A6NFE2 343 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 TRIM59Q8IWR1 403 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 RASGEF1CQ8N431 466 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 LRRC57Q8N9N7 239 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 NEUROG2Q9H2A3 272 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 MYH4Q9Y623 1939 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 ROBO3Q96MS0 1386 aa19.25■□□□□ 0.67
RAB40C-205ENST00000539661 TRAF5O00463 557 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 GSTA1P08263 222 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 ZBTB48P10074 688 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-205ENST00000539661 ANXA13P27216 316 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 MAGOHP61326 146 aaKnown RBP19.24■□□□□ 0.67
RAB40C-205ENST00000539661 TBCKQ8TEA7 893 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 DDX12PQ92771 950 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 MAGOHBQ96A72 148 aaKnown RBP19.24■□□□□ 0.67
RAB40C-205ENST00000539661 TLCD1Q96CP7 247 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 CHMP6Q96FZ7 201 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 A0A1B0GUA9 196 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 ERCC3P19447 782 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 TXKP42681 527 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 ERMARDQ5T6L9 678 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 C12orf60Q5U649 245 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 TLDC1Q6P9B6 456 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 FBXO33Q7Z6M2 555 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 SCLT1Q96NL6 688 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 GANQ9H2C0 597 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 MCM9Q9NXL9 1143 aa19.24■□□□□ 0.67
RAB40C-205ENST00000539661 NOC2LQ9Y3T9 749 aaKnown RBP19.24■□□□□ 0.67
RAB40C-205ENST00000539661 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.24■□□□□ 0.67
RAB40C-205ENST00000539661 PPIP5K2O43314 1243 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 ITPK1Q13572 414 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 CALCRLQ16602 461 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 TMEM119Q4V9L6 283 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 SOGA3Q5TF21 947 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 DDX42Q86XP3 938 aaKnown RBP eCLIP19.23■□□□□ 0.67
RAB40C-205ENST00000539661 TEX11Q8IYF3 940 aa19.23■□□□□ 0.67
RAB40C-205ENST00000539661 CCDC24Q8N4L8 307 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms