RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PROM2Q8N271 834 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 CCDC197Q8NCU1 140 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 COA7Q96BR5 231 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 BRIP1Q9BX63 1249 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 NHEJ1Q9H9Q4 299 aaPredicted RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ANGPTL3Q9Y5C1 460 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 RFX7Q2KHR2 1363 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MGEA5O60502 916 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ECEL1O95672 775 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 DIXDC1Q155Q3 683 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 TCP11X2Q5H9J9 407 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 RSRC2Q7L4I2 434 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ZNF579Q8NAF0 562 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MXD3Q9BW11 206 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 SEC31BQ9NQW1 1179 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 K7ERI5 159 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 CLIC2O15247 247 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 DTNBO60941 627 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ASNSP08243 561 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 SAT1P21673 171 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 JAK3P52333 1124 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 RESTQ13127 1097 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 SLMAPQ14BN4 828 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 RASGRP4Q8TDF6 673 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 WHAMMQ8TF30 809 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 OSBP2Q969R2 916 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MASTLQ96GX5 879 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 GCNAQ96QF7 691 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PIGSQ96S52 555 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PUS7LQ9H0K6 701 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 DBNDD1Q9H9R9 158 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 EPB41L5Q9HCM4 733 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MAP2P11137 1827 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 OPHN1O60890 802 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 LRRN2O75325 713 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 EIF3BP55884 814 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PDE1BQ01064 536 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 THOC5Q13769 683 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 IQCB1Q15051 598 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 TMTC3Q6ZXV5 915 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 SETBP1Q9Y6X0 1596 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 PPFIA2O75334 1257 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 NFKBIAP25963 317 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 PPARGP37231 505 aaPredicted RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 DPCR1Q3MIW9 517 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 NAA35Q5VZE5 725 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ELMSAN1Q6PJG2 1045 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 RNF139Q8WU17 664 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ZC3H15Q8WU90 426 aaKnown RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 PAGE5Q96GU1 130 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 THEGQ9P2T0 379 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 SLC8A2Q9UPR5 921 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ROBO2Q9HCK4 1378 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 USP17L8P0C7I0 530 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 STX1BP61266 288 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 TFAMQ00059 246 aaKnown RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 PKP1Q13835 747 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 NECTIN1Q15223 517 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ARL13BQ3SXY8 428 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 DARS2Q6PI48 645 aaKnown RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 SKA2Q8WVK7 121 aaPredicted RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 GDAP1L1Q96MZ0 367 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ERBB3P21860 1342 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 PODXLO00592 558 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 GPC4O75487 556 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 MTERF2Q49AM1 385 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 RESP18Q5W5W9 173 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 CAPN12Q6ZSI9 719 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 RASEFQ8IZ41 740 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 CLTCQ00610 1675 aaKnown RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 PRPSAP2O60256 369 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 GFPT2O94808 682 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 TJP3O95049 919 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 KRT1P04264 644 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 SLC16A2P36021 539 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 JADE1Q6IE81 842 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 NRKQ7Z2Y5 1582 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 RHOT2Q8IXI1 618 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 FEM1BQ9UK73 627 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ALKQ9UM73 1620 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 MXI1P50539 228 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 DALRD3Q5D0E6 543 aaKnown RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 KRT39Q6A163 491 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 DGKHQ86XP1 1220 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 DNAAF3Q8N9W5 541 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 PCIF1Q9H4Z3 704 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 TLK1Q9UKI8 766 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ORC6Q9Y5N6 252 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 SYNJ2BP-COX16A0A087WUM0 186 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 PAMP19021 973 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ANKRD20A4Q4UJ75 823 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ANKRD20A8PQ5CZ79 823 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ANKRD20A2Q5SQ80 823 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ANKRD20A1Q5TYW2 823 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 PPP1R18Q6NYC8 613 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 DDX27Q96GQ7 796 aaKnown RBP7□□□□□ -1.29
LSAMP-207ENST00000539563 COX16Q9P0S2 106 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 SCINQ9Y6U3 715 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 ANXA13P27216 316 aa7□□□□□ -1.29
LSAMP-207ENST00000539563 MB21D1Q8N884 522 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms