RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 GRIN1Q05586 938 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 PTGDRQ13258 359 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 GNL2Q13823 731 aaKnown RBP14.69□□□□□ -0.06
CCDC42-202ENST00000539522 UGCGQ16739 394 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 LRCH2Q5VUJ6 765 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 ANKLE1Q8NAG6 615 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 FERMT2Q96AC1 680 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 PAWRQ96IZ0 340 aaKnown RBP14.69□□□□□ -0.06
CCDC42-202ENST00000539522 TSEN34Q9BSV6 310 aaKnown RBP14.69□□□□□ -0.06
CCDC42-202ENST00000539522 MLXIPQ9HAP2 919 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 WRAP73Q9P2S5 460 aaPredicted RBP14.69□□□□□ -0.06
CCDC42-202ENST00000539522 STBD1O95210 358 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 F2P00734 622 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 LGALS2P05162 132 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 TCF7P36402 384 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 CPT1AP50416 773 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 ATP2C1P98194 919 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 PPP2R5CQ13362 524 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 ORC2Q13416 577 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 SF3A1Q15459 793 aaKnown RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 CALCRLQ16602 461 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 RNF180Q86T96 592 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 CCDC60Q8IWA6 550 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 ARRDC4Q8NCT1 418 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 TNPO1Q92973 898 aaKnown RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 FAM20AQ96MK3 541 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 CTAGE1Q96RT6 745 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 NAP1L4Q99733 375 aaKnown RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 ZSCAN16Q9H4T2 348 aaPredicted RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 TBC1D22BQ9NU19 505 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 PCDH10Q9P2E7 1040 aa14.68□□□□□ -0.06
CCDC42-202ENST00000539522 NOL7Q9UMY1 257 aaKnown RBP14.68□□□□□ -0.06
CCDC42-202ENST00000539522 ELP1O95163 1332 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 ARID2Q68CP9 1835 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 ZNF862O60290 1169 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 GAS7O60861 476 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 PPFIA4O75335 1185 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 MYL3P08590 195 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 OR52Z1P0C646 297 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 SUPT20HL2P0C7V6 817 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 TXKP42681 527 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 FOXD4L6Q3SYB3 417 aaPredicted RBP14.67□□□□□ -0.06
CCDC42-202ENST00000539522 ZNF746Q6NUN9 644 aaPredicted RBP14.67□□□□□ -0.06
CCDC42-202ENST00000539522 FOXD4L3Q6VB84 417 aaPredicted RBP14.67□□□□□ -0.06
CCDC42-202ENST00000539522 CLEC17AQ6ZS10 378 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 SLC43A3Q8NBI5 491 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 SEPT1Q8WYJ6 367 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 SDF4Q9BRK5 362 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 TEKT3Q9BXF9 490 aa14.67□□□□□ -0.06
CCDC42-202ENST00000539522 TTC12Q9H892 705 aaPredicted RBP14.67□□□□□ -0.06
CCDC42-202ENST00000539522 MYH9P35579 1960 aaKnown RBP14.67□□□□□ -0.06
CCDC42-202ENST00000539522 TRIP12Q14669 1992 aaPredicted RBP14.67□□□□□ -0.06
CCDC42-202ENST00000539522 EMSYQ7Z589 1322 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 POTEMA6NI47 508 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 CHMP2AO43633 222 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 NASPP49321 788 aaPredicted RBP14.66□□□□□ -0.06
CCDC42-202ENST00000539522 CDK7P50613 346 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 SNX17Q15036 470 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 DGKDQ16760 1214 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 LRRC26Q2I0M4 334 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 GBP4Q96PP9 640 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 RNPEPQ9H4A4 650 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 TFIP11Q9UBB9 837 aaKnown RBP14.66□□□□□ -0.06
CCDC42-202ENST00000539522 ATP6V1DQ9Y5K8 247 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 IGSF9BQ9UPX0 1349 aa14.66□□□□□ -0.06
CCDC42-202ENST00000539522 PP2D1A8MPX8 630 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 HOXC8P31273 242 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 TECP42680 631 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 KRT76Q01546 638 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 DNM1Q05193 864 aaKnown RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 ECM1Q16610 540 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 UTP14CQ5TAP6 766 aaKnown RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 IGSF22Q8N9C0 903 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 AFAP1L1Q8TED9 768 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 MTG1Q9BT17 334 aaPredicted RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 MMTAG2Q9BU76 263 aaKnown RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 SENP6Q9GZR1 1112 aaPredicted RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 C11orf49Q9H6J7 331 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 SPC25Q9HBM1 224 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 DISC1Q9NRI5 854 aa14.65□□□□□ -0.06
CCDC42-202ENST00000539522 FBXO2Q9UK22 296 aaPredicted RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 MAFBQ9Y5Q3 323 aaPredicted RBP14.65□□□□□ -0.06
CCDC42-202ENST00000539522 ZBTB42B2RXF5 422 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 KBTBD13C9JR72 458 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 NOP56O00567 594 aaKnown RBP14.64□□□□□ -0.07
CCDC42-202ENST00000539522 SPATA31C1P0DKV0 1188 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 PRPHP41219 470 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 PSEN2P49810 448 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 CEBPZQ03701 1054 aaKnown RBP14.64□□□□□ -0.07
CCDC42-202ENST00000539522 NBPF20Q3BBV1 942 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 SWSAP1Q6NVH7 229 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 SLC39A5Q6ZMH5 540 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 SMAP1Q8IYB5 467 aaPredicted RBP14.64□□□□□ -0.07
CCDC42-202ENST00000539522 SLFN12Q8IYM2 578 aa14.64□□□□□ -0.07
CCDC42-202ENST00000539522 LINC00301Q8NCQ3 95 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms