RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PGBD1Q96JS3 809 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 COL25A1Q9BXS0 654 aaPredicted RBP25.41■■□□□ 1.66
SCARB1-206ENST00000539320 ANO3Q9BYT9 981 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 SETD4Q9NVD3 440 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 NID2Q14112 1375 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 TTC28Q96AY4 2481 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 CCDC196A0A1B0GTZ2 297 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 MAFGO15525 162 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 TLL1O43897 1013 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 FOSP01100 380 aaPredicted RBP25.4■■□□□ 1.66
SCARB1-206ENST00000539320 AP3B2Q13367 1082 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 LMBR1Q8WVP7 490 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 SEPT1Q8WYJ6 367 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 GLT8D2Q9H1C3 349 aa25.4■■□□□ 1.66
SCARB1-206ENST00000539320 SMCO2A6NFE2 343 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 ARHGEF15O94989 841 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 NEFLP07196 543 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 CTSHP09668 335 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 ARHGAP4P98171 946 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 IKBKEQ14164 716 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 PPM1EQ8WY54 764 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 MXRA8Q9BRK3 442 aa25.39■■□□□ 1.66
SCARB1-206ENST00000539320 KAT6AQ92794 2004 aa25.39■■□□□ 1.65
SCARB1-206ENST00000539320 GSTTP1A0A1W2PQM5 241 aa25.38■■□□□ 1.65
SCARB1-206ENST00000539320 RPS6KB1P23443 525 aa25.38■■□□□ 1.65
SCARB1-206ENST00000539320 ADD1P35611 737 aaKnown RBP25.38■■□□□ 1.65
SCARB1-206ENST00000539320 TAP1Q03518 808 aa25.38■■□□□ 1.65
SCARB1-206ENST00000539320 JPH1Q9HDC5 661 aaPredicted RBP25.38■■□□□ 1.65
SCARB1-206ENST00000539320 NRCAMQ92823 1304 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 MICAL3Q7RTP6 2002 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 PSMA5P28066 241 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 SREBF1P36956 1147 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 ADAM17P78536 824 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 PPFIA1Q13136 1202 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 PFKFB3Q16875 520 aaPredicted RBP25.37■■□□□ 1.65
SCARB1-206ENST00000539320 TMCO2Q7Z6W1 182 aaPredicted RBP25.37■■□□□ 1.65
SCARB1-206ENST00000539320 FBXL16Q8N461 479 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 ZBED2Q9BTP6 218 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 CERS4Q9HA82 394 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 KCNH7Q9NS40 1196 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 ERAP1Q9NZ08 941 aa25.37■■□□□ 1.65
SCARB1-206ENST00000539320 PRRC2BQ5JSZ5 2229 aaKnown RBP25.36■■□□□ 1.65
SCARB1-206ENST00000539320 GJB5O95377 273 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 SCG2P13521 617 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 MARK3P27448 753 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 CLK2P49760 499 aaKnown RBP25.36■■□□□ 1.65
SCARB1-206ENST00000539320 CEP55Q53EZ4 464 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 DBF4BQ8NFT6 615 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 GLG1Q92896 1179 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 AGXT2Q9BYV1 514 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 TMEM260Q9NX78 707 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 SLC9A2Q9UBY0 812 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 NFASCO94856 1347 aa25.36■■□□□ 1.65
SCARB1-206ENST00000539320 RBAK-RBAKDNI3L0D1 243 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 PLEKHG4Q58EX7 1191 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 CYP2W1Q8TAV3 490 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 ARNTL2Q8WYA1 636 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 SDF4Q9BRK5 362 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 SMARCAD1Q9H4L7 1026 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 PRDM6Q9NQX0 595 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 VCANP13611 3396 aa25.35■■□□□ 1.65
SCARB1-206ENST00000539320 ESYT2A0FGR8 921 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 LCHNA4D1U4 455 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 EPOPA6NHQ4 379 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 EPB41L2O43491 1005 aaKnown RBP25.34■■□□□ 1.65
SCARB1-206ENST00000539320 MKRN4PQ13434 485 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-206ENST00000539320 CCDC85BQ15834 202 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-206ENST00000539320 TAF2Q6P1X5 1199 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 MICALL1Q8N3F8 863 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 CCDC12Q8WUD4 166 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-206ENST00000539320 SEPT8Q92599 483 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 THEGQ9P2T0 379 aa25.34■■□□□ 1.65
SCARB1-206ENST00000539320 RFXAPO00287 272 aa25.33■■□□□ 1.65
SCARB1-206ENST00000539320 GTPBP6O43824 516 aaPredicted RBP25.33■■□□□ 1.65
SCARB1-206ENST00000539320 ARP10275 920 aa25.33■■□□□ 1.65
SCARB1-206ENST00000539320 GRIK4Q16099 956 aa25.33■■□□□ 1.65
SCARB1-206ENST00000539320 JAKMIP3Q5VZ66 844 aa25.33■■□□□ 1.65
SCARB1-206ENST00000539320 RAD9AQ99638 391 aa25.33■■□□□ 1.65
SCARB1-206ENST00000539320 AGO4Q9HCK5 861 aaKnown RBP25.33■■□□□ 1.65
SCARB1-206ENST00000539320 TUBE1Q9UJT0 475 aa25.33■■□□□ 1.65
SCARB1-206ENST00000539320 AMHP03971 560 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 ZNF76P36508 570 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 FAM26DQ5JW98 314 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 FAM117BQ6P1L5 589 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.32■■□□□ 1.64
SCARB1-206ENST00000539320 RUFY4Q6ZNE9 571 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 SPRED2Q7Z698 418 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 MYOCDQ8IZQ8 938 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 PCYT2Q99447 389 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 AZI2Q9H6S1 392 aa25.32■■□□□ 1.64
SCARB1-206ENST00000539320 MEIS1O00470 390 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 PRPF3O43395 683 aaKnown RBP25.31■■□□□ 1.64
SCARB1-206ENST00000539320 ACTR2P61160 394 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 AKAP17AQ02040 695 aaKnown RBP25.31■■□□□ 1.64
SCARB1-206ENST00000539320 ITGB3BPQ13352 177 aaPredicted RBP25.31■■□□□ 1.64
SCARB1-206ENST00000539320 PKN1Q16512 942 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 TJAP1Q5JTD0 557 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 NIPA1Q7RTP0 329 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 RPAINQ86UA6 219 aa25.31■■□□□ 1.64
SCARB1-206ENST00000539320 PHKBQ93100 1093 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms