RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 CLK2P49760 499 aaKnown RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 NPY5RQ15761 445 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 PFKFB3Q16875 520 aaPredicted RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 FAM47CQ5HY64 1035 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 JAKMIP3Q5VZ66 844 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 PCNX4Q63HM2 1172 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 GDF6Q6KF10 455 aaPredicted RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 POTEBQ6S5H4 581 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 HFE2Q6ZVN8 426 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 CYFIP1Q7L576 1253 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 NECAB1Q8N987 351 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 PRSS33Q8NF86 280 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 EMID1Q96A84 441 aaPredicted RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 SPATA33Q96N06 139 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 KIF2CQ99661 725 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 C16orf70Q9BSU1 422 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 SLC26A6Q9BXS9 759 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 TM6SF1Q9BZW5 370 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 MAF1Q9H063 256 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 RBM28Q9NW13 759 aaKnown RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 BARHL2Q9NY43 387 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 VPS54Q9P1Q0 977 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 YBX2Q9Y2T7 364 aaKnown RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 UBIAD1Q9Y5Z9 338 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 CYP46A1Q9Y6A2 500 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 HAS3O00219 553 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 NKRFO15226 690 aaKnown RBP eCLIP8.29□□□□□ -1.08
LMO3-220ENST00000539232 PRPF3O43395 683 aaKnown RBP8.29□□□□□ -1.08
LMO3-220ENST00000539232 CABYRO75952 493 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 SCG2P13521 617 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 KCNA2P16389 499 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 PSMA5P28066 241 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 ICAM3P32942 547 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 PSEN2P49810 448 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 CPT1AP50416 773 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 ADCY7P51828 1080 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 SCRN1Q12765 414 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 ITGB3BPQ13352 177 aaPredicted RBP8.29□□□□□ -1.08
LMO3-220ENST00000539232 LAMC2Q13753 1193 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 MFSD5Q6N075 450 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 PSRC1Q6PGN9 363 aaPredicted RBP8.29□□□□□ -1.08
LMO3-220ENST00000539232 TRAF7Q6Q0C0 670 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 ZNF365Q70YC5 407 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 PPTC7Q8NI37 304 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 CRYGNQ8WXF5 182 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 GJA10Q969M2 543 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 IL17RAQ96F46 866 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 PCYT2Q99447 389 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 GPR20Q99678 358 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 MTIF3Q9H2K0 278 aaKnown RBP8.29□□□□□ -1.08
LMO3-220ENST00000539232 HIPK3Q9H422 1215 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 POLR3EQ9NVU0 708 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 MAP3K20Q9NYL2 800 aaKnown RBP8.29□□□□□ -1.08
LMO3-220ENST00000539232 HDAC6Q9UBN7 1215 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 NID2Q14112 1375 aa8.29□□□□□ -1.08
LMO3-220ENST00000539232 CHD6Q8TD26 2715 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 GSTTP1A0A1W2PQM5 241 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 B4DLN1 442 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 FAM86B1E9PN63 330 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 ZEB2O60315 1214 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 CCNE2O96020 404 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 F2P00734 622 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 LGALS2P05162 132 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 FAM86B2P0C5J1 330 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 IFNAR1P17181 557 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 ID4P47928 161 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
LMO3-220ENST00000539232 RCAN1P53805 252 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 AK2P54819 239 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 MBTPS1Q14703 1052 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 MFSD10Q14728 455 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 ME3Q16798 604 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 KIAA0753Q2KHM9 967 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 TRIM71Q2Q1W2 868 aaKnown RBP8.28□□□□□ -1.08
LMO3-220ENST00000539232 UTP14CQ5TAP6 766 aaKnown RBP8.28□□□□□ -1.08
LMO3-220ENST00000539232 SAMD3Q8N6K7 520 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 OXER1Q8TDS5 423 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 CUL5Q93034 780 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 ANO3Q9BYT9 981 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 RNPEPQ9H4A4 650 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 KCNJ14Q9UNX9 436 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 ACACBO00763 2458 aa8.28□□□□□ -1.08
LMO3-220ENST00000539232 BAZ2BQ9UIF8 2168 aaKnown RBP8.28□□□□□ -1.08
LMO3-220ENST00000539232 IGLV3-22A0A075B6J6 115 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 FAM205CA6NFA0 338 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 FIBPO43427 364 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 EPB41L2O43491 1005 aaKnown RBP8.27□□□□□ -1.09
LMO3-220ENST00000539232 JAK2O60674 1132 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 PFKFB2O60825 505 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 FDPSP14324 419 aaKnown RBP8.27□□□□□ -1.09
LMO3-220ENST00000539232 ARHGAP4P98171 946 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 TRAF1Q13077 416 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 DGKDQ16760 1214 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 EARS2Q5JPH6 523 aaKnown RBP8.27□□□□□ -1.09
LMO3-220ENST00000539232 NFRKBQ6P4R8 1299 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 METTL7BQ6UX53 244 aa8.27□□□□□ -1.09
LMO3-220ENST00000539232 TMCO2Q7Z6W1 182 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms