RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 RABEP1Q15276 862 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 CCDC96Q2M329 555 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 ESR2Q92731 530 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 KCNB2Q92953 911 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 CLP1Q92989 425 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 KATNAL1Q9BW62 490 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 IGFLR1Q9H665 355 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 RC3H2Q9HBD1 1191 aaKnown RBP14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 COL20A1Q9P218 1284 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 CYP46A1Q9Y6A2 500 aa14.44□□□□□ -0.1
CLSTN3-208ENST00000538933 WDR19Q8NEZ3 1342 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 KIAA1671Q9BY89 1806 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 TTC3P53804 2025 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 TSPY2A6NKD2 308 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 B4E1Z4 1266 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 H0Y858 1186 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 CTNNB1P35222 781 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 FIBCD1Q8N539 461 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 SMRP1Q8NCR6 262 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 PPTC7Q8NI37 304 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 SEPT8Q92599 483 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 IL17RAQ96F46 866 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 TAAR1Q96RJ0 339 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 C11orf84Q9BUA3 381 aaPredicted RBP14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 IFIH1Q9BYX4 1025 aaKnown RBP14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 GPCPD1Q9NPB8 672 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 TLR9Q9NR96 1032 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 MYO10Q9HD67 2058 aa14.43□□□□□ -0.1
CLSTN3-208ENST00000538933 NEDD4P46934 1319 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 FRMPD2Q68DX3 1309 aaPredicted RBP14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 ERICH2A1L162 156 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 PRR23AA6NEV1 266 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 ORC4O43929 436 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 PPFIA4O75335 1185 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 MCM5P33992 734 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 NT5C2P49902 561 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 NEK4P51957 841 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 COASYQ13057 564 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 LAMC2Q13753 1193 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 SART3Q15020 963 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 ADCK5Q3MIX3 580 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 STOX1Q6ZVD7 989 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 TMEM47Q9BQJ4 181 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 UBAC1Q9BSL1 405 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 TM6SF1Q9BZW5 370 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 TAF6LQ9Y6J9 622 aa14.42□□□□□ -0.1
CLSTN3-208ENST00000538933 EP300Q09472 2414 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 KDM4AO75164 1064 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 MMP1P03956 469 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 FGRP09769 529 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 DNAJB1P25685 340 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 ANP32AP39687 249 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 RUFY3Q7L099 469 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 DHX32Q7L7V1 743 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 IQCA1Q86XH1 822 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 SYTL5Q8TDW5 730 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 IWS1Q96ST2 819 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 C16orf70Q9BSU1 422 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 MAF1Q9H063 256 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 PDRG1Q9NUG6 133 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 PLAGL2Q9UPG8 496 aa14.41□□□□□ -0.1
CLSTN3-208ENST00000538933 NCOR2Q9Y618 2525 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 PRC1O43663 620 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 GLP2RO95838 553 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 PDGFBP01127 241 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 PDHBP11177 359 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 CPA1P15085 419 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 RPS6KB1P23443 525 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 NBL1P41271 181 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 NUBP1P53384 320 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 STXBP2Q15833 593 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 MYSM1Q5VVJ2 828 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 ADGRD2Q7Z7M1 963 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 DHX37Q8IY37 1157 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 EFHBQ8N7U6 833 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 NSUN6Q8TEA1 469 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 ZNF689Q96CS4 500 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 ZSWIM6Q9HCJ5 1215 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 TRPC6Q9Y210 931 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 USP15Q9Y4E8 981 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 MYH6P13533 1939 aa14.4□□□□□ -0.1
CLSTN3-208ENST00000538933 IFIT3O14879 490 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 TREHO43280 583 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 GALR2O43603 387 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 EIF3JO75822 258 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 RGS20O76081 388 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 TOP1P11387 765 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 ICAM3P32942 547 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 NDUFV1P49821 464 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 ZNF543Q08ER8 600 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 HSDL1Q3SXM5 330 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 CCDC178Q5BJE1 867 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 ATP6V0A1Q93050 837 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 PHF7Q9BWX1 381 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 RWDD3Q9Y3V2 267 aa14.39□□□□□ -0.11
CLSTN3-208ENST00000538933 PLXNA4Q9HCM2 1894 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms