RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF263O14978 683 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 SRGAP2O75044 1071 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-207ENST00000538862 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 HSP90B2PQ58FF3 399 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 MUM1L1Q5H9M0 696 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 DYMQ7RTS9 669 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 DDX12PQ92771 950 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 ZFP91Q96JP5 570 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-207ENST00000538862 JMJD4Q9H9V9 463 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 ARHGAP20Q9P2F6 1191 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 PCDHA13Q9Y5I0 950 aa16.09■□□□□ 0.17
CDCA3-207ENST00000538862 POTEMA6NI47 508 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 NKRFO15226 690 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 SLC26A4O43511 780 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 TACC1O75410 805 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 IDEP14735 1019 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 AKR1B1P15121 316 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 GCFC2P16383 781 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 CYP27A1Q02318 531 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 ITIH3Q06033 890 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 LRRC55Q6ZSA7 311 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 CDAN1Q8IWY9 1227 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 LRRC47Q8N1G4 583 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 NAP1L4Q99733 375 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 IFIH1Q9BYX4 1025 aaKnown RBP16.08■□□□□ 0.16
CDCA3-207ENST00000538862 DUSP10Q9Y6W6 482 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.16
CDCA3-207ENST00000538862 MACROD2A1Z1Q3 448 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 HDLBPQ00341 1268 aaKnown RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 RASA3Q14644 834 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 CCDC96Q2M329 555 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 HYIQ5T013 277 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 GPATCH4Q5T3I0 446 aaKnown RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 ADGRF4Q8IZF3 695 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 CUL5Q93034 780 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 ZIC5Q96T25 663 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 NUDT12Q9BQG2 462 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 MMRN2Q9H8L6 949 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 VPS18Q9P253 973 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 SSC5DA1L4H1 1573 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 LRRIQ3A6PVS8 624 aaPredicted RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 PJA2O43164 708 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 ECE1P42892 770 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 TNNI2P48788 182 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 KIF11P52732 1056 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 MYOCDQ8IZQ8 938 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 CAGE1Q8TC20 777 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 RUBCNQ92622 972 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 DNAJC19Q96DA6 116 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 CAPZA3Q96KX2 299 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 ZDHHC15Q96MV8 337 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 JADE2Q9NQC1 790 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 FAM207AQ9NSI2 230 aaPredicted RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 DDX25Q9UHL0 483 aaKnown RBP16.07■□□□□ 0.16
CDCA3-207ENST00000538862 SERPINB13Q9UIV8 391 aa16.07■□□□□ 0.16
CDCA3-207ENST00000538862 EPHB6O15197 1021 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 PLEKP08567 350 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 EIF4A3P38919 411 aaKnown RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 AARSP49588 968 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 GYS2P54840 703 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 FKBP3Q00688 224 aaKnown RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 PICALMQ13492 652 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 NBPF12Q5TAG4 269 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 CCDC70Q6NSX1 233 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 RGMBQ6NW40 437 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 HHIPL2Q6UWX4 724 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 KCNK18Q7Z418 384 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 BAP1Q92560 729 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 HAS1Q92839 578 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 MTMR8Q96EF0 704 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 NT5C3AQ9H0P0 336 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 GLT8D2Q9H1C3 349 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 NUCKS1Q9H1E3 243 aaKnown RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 DEF6Q9H4E7 631 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 TMEM51Q9NW97 253 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 SNX12Q9UMY4 172 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 KDM3AQ9Y4C1 1321 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 SSU72P8A0A1W2PR75 194 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 ZBTB5O15062 677 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 N4BP1O75113 896 aaKnown RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 NF2P35240 595 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
CDCA3-207ENST00000538862 ZCWPW2Q504Y3 356 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 MMGT1Q8N4V1 131 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 CCDC102AQ96A19 550 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
CDCA3-207ENST00000538862 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms