RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	JAKMIP3	Q5VZ66	844 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZNF365	Q70YC5	407 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PLPPR4	Q7Z2D5	763 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LRCH3	Q96II8	777 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ALG1	Q9BT22	464 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	BCAS3	Q9H6U6	928 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	AGO4	Q9HCK5	861 aa	Known RBP	14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TBC1D22B	Q9NU19	505 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TMEM260	Q9NX78	707 aa		14.01	□□□□□ -0.17
CLTCL1-205	ENST00000538828	UMODL1	Q5DID0	1318 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	IGKV6D-21	A0A0A0MT36	114 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	FAM86B1	E9PN63	330 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SEC24B	O95487	1268 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CXCL10	P02778	98 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	FAM86B2	P0C5J1	330 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SMIM10L2A	P0DMW4	78 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SMIM10L2B	P0DMW5	78 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RBM25	P49756	843 aa	Known RBP	14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	NEK4	P51957	841 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CCL23	P55773	120 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TRIM71	Q2Q1W2	868 aa	Known RBP	14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PLA2G4D	Q86XP0	818 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	BLID	Q8IZY5	108 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CYP2W1	Q8TAV3	490 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	VWCE	Q96DN2	955 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RNPEP	Q9H4A4	650 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	VPS54	Q9P1Q0	977 aa		14	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	DHX15	O43143	795 aa	Known RBP	13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	EFCAB14	O75071	495 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	BAIAP3	O94812	1187 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	AR	P10275	920 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CKB	P12277	381 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ACTN1	P12814	892 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CYP3A7	P24462	503 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	NPY5R	Q15761	445 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TAF2	Q6P1X5	1199 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LRRC8D	Q7L1W4	858 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PHOSPHO2	Q8TCD6	241 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	DHX38	Q92620	1227 aa	Known RBP	13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ATP6V0A1	Q93050	837 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	GTF3C6	Q969F1	213 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PGBD1	Q96JS3	809 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PHF20	Q9BVI0	1012 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	AZI2	Q9H6S1	392 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TET1	Q8NFU7	2136 aa		13.99	□□□□□ -0.17
CLTCL1-205	ENST00000538828	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RRN3P2	A6NIE6	340 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	IPO5	O00410	1097 aa	Known RBP	13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ACTR2	P61160	394 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	KRT76	Q01546	638 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	STK3	Q13188	491 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ITGB3BP	Q13352	177 aa	Predicted RBP	13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ME3	Q16798	604 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	KRT25	Q7Z3Z0	450 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	MBOAT7	Q96N66	472 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RIT2	Q99578	217 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	NAP1L4	Q99733	375 aa	Known RBP	13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LIMCH1	Q9UPQ0	1083 aa		13.98	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CTDNEP1	O95476	244 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RAB30	Q15771	203 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828		Q4G0T1	1027 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	FAM26D	Q5JW98	314 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	UTP14C	Q5TAP6	766 aa	Known RBP	13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZNF697	Q5TEC3	545 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ABHD15	Q6UXT9	468 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	DEFB123	Q8N688	67 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	RDM1	Q8NG50	284 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	GLG1	Q92896	1179 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LENG9	Q96B70	501 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SCLY	Q96I15	445 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	PCYT2	Q99447	389 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LARP6	Q9BRS8	491 aa	Known RBP	13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LLPH	Q9BRT6	129 aa	Known RBP	13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ZNF577	Q9BSK1	485 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ORC3	Q9UBD5	711 aa	Predicted RBP	13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TCEAL9	Q9UHQ7	104 aa		13.97	□□□□□ -0.17
CLTCL1-205	ENST00000538828	EDIL3	O43854	480 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SORBS3	O60504	671 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	ACR	P10323	421 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	GCFC2	P16383	781 aa	Known RBP	13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	STAT5B	P51692	787 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	CHMP4BP1	P59074	171 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	HIC1	Q14526	733 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	NONO	Q15233	471 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	FAM160B1	Q5W0V3	765 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TRAF7	Q6Q0C0	670 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TRIM50	Q86XT4	487 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	TBCK	Q8TEA7	893 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	LMBR1	Q8WVP7	490 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SLC9A7	Q96T83	725 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	KIF2C	Q99661	725 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	MTMR10	Q9NXD2	777 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SLC4A7	Q9Y6M7	1214 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	SCN5A	Q14524	2016 aa		13.96	□□□□□ -0.17
CLTCL1-205	ENST00000538828	MYH9	P35579	1960 aa	Known RBP	13.96	□□□□□ -0.18

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