RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 OR8K1Q8NGG5 319 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 RNF139Q8WU17 664 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 PARK7Q99497 189 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 TUBGCP2Q9BSJ2 902 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 TMEM39BQ9GZU3 492 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 STK17AQ9UEE5 414 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CPSF3Q9UKF6 684 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 ARHGEF37A1IGU5 675 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 MED7O43513 233 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 GMNNO75496 209 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 VIMP08670 466 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 PHKA2P46019 1235 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 NEDD9Q14511 834 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 QRICH1Q2TAL8 776 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ZNF658Q5TYW1 1059 aaPredicted RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 TAOK1Q7L7X3 1001 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 TRIML1Q8N9V2 468 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 HAUS1Q96CS2 278 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 FAM167AQ96KS9 214 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 OSBPL5Q9H0X9 879 aaPredicted RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 GCNT4Q9P109 453 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 IVLP07476 585 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ABCD1P33897 745 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ADCY8P40145 1251 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 LIFRP42702 1097 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 SARNPP82979 210 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 GRM4Q14833 912 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ZNF280CQ8ND82 737 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 IQCDQ96DY2 449 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 EPSTI1Q96J88 318 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 PIDD1Q9HB75 910 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 RRAGCQ9HB90 399 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 GJB4Q9NTQ9 266 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 TMEM63CQ9P1W3 806 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 MAN1B1Q9UKM7 699 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CNTNAP4Q9C0A0 1308 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ASB14A6NK59 587 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ARHGAP4P98171 946 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 PFKFB3Q16875 520 aaPredicted RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 LBHD1Q9BQE6 289 aaPredicted RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 CARD6Q9BX69 1037 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ANAPC4Q9UJX5 808 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 FNDC3AQ9Y2H6 1198 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 CD163L1Q9NR16 1453 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 USP42Q9H9J4 1324 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 GSG1L2A8MUP6 293 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 WDR64B1ANS9 1081 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 NTSR2O95665 410 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 BPIFB4P59827 614 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 POTEDQ86YR6 584 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 PARD3BQ8TEW8 1205 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 NSUN4Q96CB9 384 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 ZNF653Q96CK0 615 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 TSKSQ9UJT2 592 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 FLT1P17948 1338 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 SLC16A4O15374 487 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 GFPT2O94808 682 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 TPD52P55327 224 aaPredicted RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 CYFIP1Q7L576 1253 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 SCN4BQ8IWT1 228 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 AFAP1L2Q8N4X5 818 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 LY9Q9HBG7 655 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 FAM184BQ9ULE4 1060 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 ZNF521Q96K83 1311 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 LRRIQ1Q96JM4 1722 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 DLC1Q96QB1 1528 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 ARHGAP6O43182 974 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 GOLGA8FQ08AF8 430 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 GOLGA8DPQ0D2H9 430 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SREBF2Q12772 1141 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 CLEC10AQ8IUN9 316 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 CCNYQ8ND76 341 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SCYL1Q96KG9 808 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SUGT1Q9Y2Z0 365 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 ADAMTS13Q76LX8 1427 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 AGLP35573 1532 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 KDM4FA0A1W2PPD8 638 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 KRIT1O00522 736 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 TXNP10599 105 aaKnown RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 KRT15P19012 456 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 DYNLT1P63172 113 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 MAPK6Q16659 721 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 NAA35Q5VZE5 725 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 ATG9AQ7Z3C6 839 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 PNMA8AQ86V59 439 aaPredicted RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 ZNF233A6NK53 670 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 DPYSL4O14531 572 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 UPP2O95045 317 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 NECTIN1Q15223 517 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SF3B3Q15393 1217 aaKnown RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 DHTKD1Q96HY7 919 aaPredicted RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 POLR3FQ9H1D9 316 aaPredicted RBP5.82□□□□□ -1.48
LRP6-203ENST00000538239 POLR3EQ9NVU0 708 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 IRAK4Q9NWZ3 460 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 SAMD15Q9P1V8 674 aa5.82□□□□□ -1.48
LRP6-203ENST00000538239 ANAPC5Q9UJX4 755 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms