RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 INHBAP08476 426 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 RAB44Q7Z6P3 723 aaPredicted RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 MMP19Q99542 508 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 TBK1Q9UHD2 729 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 SCAF8Q9UPN6 1271 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 PNMA6FA0A0J9YX94 578 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 GPSM2P81274 684 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 DEPDC1BQ8WUY9 529 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 COPRSQ9NQ92 184 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 DNAJC17Q9NVM6 304 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 NRBP1Q9UHY1 535 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 NEDD4P46934 1319 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 USP6P35125 1406 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 SCN4BQ8IWT1 228 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PDCD6IPQ8WUM4 868 aaKnown RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 CDKL2Q92772 493 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 COA1Q9GZY4 146 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 TMEM260Q9NX78 707 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PASKQ96RG2 1323 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 RNF40O75150 1001 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 ARL4AP40617 200 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 MCAMP43121 646 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PNMA2Q9UL42 364 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 ABCC12Q96J65 1359 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 MTMR1Q13613 665 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 CYP4F22Q6NT55 531 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 C1orf228Q6PIY5 440 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 BRINP3Q76B58 766 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 LMNTD2Q8IXW0 634 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 ARHGAP24Q8N264 748 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 GBP7Q8N8V2 638 aaPredicted RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 SPDL1Q96EA4 605 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 CHRNA5P30532 468 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 SERPINB6P35237 376 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 C11orf57Q6ZUT1 292 aaPredicted RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 TMC4Q7Z404 712 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 RHPN2Q8IUC4 686 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 LRRC8AQ8IWT6 810 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 ELMOD1Q8N336 334 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 NSUN7Q8NE18 718 aaKnown RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 TYW1Q9NV66 732 aaKnown RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 MCF2LO15068 1137 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 RNF10Q8N5U6 811 aaKnown RBP12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PDZD8Q8NEN9 1154 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 AFG1LQ8WV93 481 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PARVGQ9HBI0 331 aa12.12□□□□□ -0.47
LINC00346-201ENST00000538077 PRPSAP2O60256 369 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 WHAMMP3Q1A5X7 153 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 TMEM206Q9H813 350 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 LAD1O00515 517 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 MAP4K1Q92918 833 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 RAB3IPQ96QF0 476 aaPredicted RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 PCP11498 1178 aaKnown RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 IRX4P78413 519 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 IQCDQ96DY2 449 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 LRGUKQ96M69 825 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 RRAGDQ9NQL2 400 aaPredicted RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 SPTLC3Q9NUV7 552 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 BAIAP2L1Q9UHR4 511 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 RGS12O14924 1447 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 WDR91A4D1P6 747 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 IFNAR2P48551 515 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 SLC44A5Q8NCS7 719 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 SSH2Q76I76 1423 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 SOWAHDA6NJG2 315 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 TWF2Q6IBS0 349 aaKnown RBP12.11□□□□□ -0.47
LINC00346-201ENST00000538077 SLC17A8Q8NDX2 589 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
LINC00346-201ENST00000538077 PRDX5P30044 214 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 GNL1P36915 607 aaPredicted RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ZNF445P59923 1031 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 EPN1Q9Y6I3 576 aaPredicted RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.1□□□□□ -0.47
LINC00346-201ENST00000538077 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 WDR64B1ANS9 1081 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 LARGE1O95461 756 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 DPCR1Q3MIW9 517 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 FAM160B2Q86V87 743 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 EXOC8Q8IYI6 725 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 FAM71BQ8TC56 605 aa12.1□□□□□ -0.47
LINC00346-201ENST00000538077 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms