RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 KRT24Q2M2I5 525 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CC2D2BQ6DHV5 1058 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ARMCX5Q6P1M9 558 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 NFRKBQ6P4R8 1299 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 TTC17Q96AE7 1141 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CYP4F11Q9HBI6 524 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ABCD1P33897 745 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CCDC103Q8IW40 242 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 KIRREL3Q8IZU9 778 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 TMEM87AQ8NBN3 555 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 PHF20L1A8MW92 1017 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 PDHBP11177 359 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CATSPER1Q8NEC5 780 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 GFPT2O94808 682 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 FGGP02679 453 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 GLE1Q53GS7 698 aaKnown RBP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 SGSM3Q96HU1 749 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 PDLIM2Q96JY6 352 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 DIABLOQ9NR28 239 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ABCC2Q92887 1545 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ESYT3A0FGR9 886 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ACTN1P12814 892 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 KIF11P52732 1056 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 COG1Q8WTW3 980 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 PRG4Q92954 1404 aaPredicted RBP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CCDC90BQ9GZT6 254 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ZSWIM6Q9HCJ5 1215 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 SLC39A2Q9NP94 309 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 PSD3Q9NYI0 1048 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 GCNT4Q9P109 453 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 FBXL5Q9UKA1 691 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 RIMS2Q9UQ26 1411 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CARMIL3Q8ND23 1372 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 MIA3Q5JRA6 1907 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 SFI1A8K8P3 1242 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 AFPP02771 609 aaKnown RBP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 TRIM25Q14258 630 aaKnown RBP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 CCDC85BQ15834 202 aaPredicted RBP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 NANOGNBQ7Z5D8 188 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 ZBED2Q9BTP6 218 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 TMEM165Q9HC07 324 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 SNX24Q9Y343 169 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 RPS6P62753 249 aaKnown RBP6.09□□□□□ -1.43
CSMD1-215ENST00000537824 SP4Q02446 784 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 RABGAP1LQ5R372 815 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 MAEAQ7L5Y9 396 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 TBC1D22AQ8WUA7 517 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 FIS1Q9Y3D6 152 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 DLG5Q8TDM6 1919 aa6.09□□□□□ -1.43
CSMD1-215ENST00000537824 E2F6O75461 281 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 G2E3Q7L622 706 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 PACS2Q86VP3 889 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 NHEJ1Q9H9Q4 299 aaPredicted RBP6.09□□□□□ -1.44
CSMD1-215ENST00000537824 PRDM11Q9NQV5 511 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 ANP32DO95626 131 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 DEPDC1Q5TB30 811 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 SLC26A7Q8TE54 656 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 DHTKD1Q96HY7 919 aaPredicted RBP6.09□□□□□ -1.44
CSMD1-215ENST00000537824 CYLDQ9NQC7 956 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 PAPOLBQ9NRJ5 636 aaKnown RBP6.09□□□□□ -1.44
CSMD1-215ENST00000537824 KIF17Q9P2E2 1029 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 CAB39Q9Y376 341 aaPredicted RBP6.09□□□□□ -1.44
CSMD1-215ENST00000537824 PPME1Q9Y570 386 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 NDUFB9Q9Y6M9 179 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 GPAA1O43292 621 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 SCTRP47872 440 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 Q4G0T1 1027 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 MDH1BQ5I0G3 518 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 RAPH1Q70E73 1250 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 BTBD6Q96KE9 485 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 RNPEPQ9H4A4 650 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 MCM9Q9NXL9 1143 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 STMN3Q9NZ72 180 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 DNM3Q9UQ16 869 aa6.09□□□□□ -1.44
CSMD1-215ENST00000537824 CACNA1EQ15878 2313 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RNF103-CHMP3A0A140T963 221 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RSPH10B2B2RC85 870 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 TTI1O43156 1089 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 N4BP1O75113 896 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RSPH10BP0C881 870 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 VCAM1P19320 739 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 MRPL12P52815 198 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 CDR2LQ86X02 465 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 REXO1Q8N1G1 1221 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 PLCE1Q9P212 2302 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 AFDNP55196 1824 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RASA4BC9J798 803 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RASA4O43374 803 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 ALDH18A1P54886 795 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 WAPLQ7Z5K2 1190 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 GPR101Q96P66 508 aaPredicted RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 PKD2L2Q9NZM6 624 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 MCM8Q9UJA3 840 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 EXOC7Q9UPT5 735 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 IQCA1LA6NCM1 817 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 HSPA6P17066 643 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 TBL3Q12788 808 aaKnown RBP6.08□□□□□ -1.44
CSMD1-215ENST00000537824 RCN1Q15293 331 aa6.08□□□□□ -1.44
CSMD1-215ENST00000537824 BTNL9Q6UXG8 535 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms