RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 A0A0J9YVX5 310 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 GOLGA8BA8MQT2 603 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 LGALS16A8MUM7 142 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 HDAC4P56524 1084 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 PKN1Q16512 942 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 KRT40Q6A162 431 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 THOC7Q6I9Y2 204 aaKnown RBP9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 NANOGNBQ7Z5D8 188 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 SLC17A8Q8NDX2 589 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 NOX5Q96PH1 765 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 PRMT1Q99873 361 aaKnown RBP9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 TLR10Q9BXR5 811 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 CROTQ9UKG9 612 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 PCDHA13Q9Y5I0 950 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 MST1RQ04912 1400 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 MROH1Q8NDA8 1641 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 GOLGA8AA7E2F4 631 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 RAD51CO43502 376 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 GJB6O95452 261 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 SHBGP04278 402 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 DNM2P50570 870 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 RASSF2P50749 326 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 PAK1Q13153 545 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 CFAP157Q5JU67 520 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 PGM2Q96G03 612 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 DHTKD1Q96HY7 919 aaPredicted RBP9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 MS4A14Q96JA4 679 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 TMEM237Q96Q45 408 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 STMN4Q9H169 189 aaPredicted RBP9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 GGT7Q9UJ14 662 aa9.27□□□□□ -0.93
SRGAP1-202ENST00000537556 KLF18A0A0U1RQI7 1052 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 CCDC169A6NNP5 214 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 H7C1D1 291 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 RGL2O15211 777 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 WDR46O15213 610 aaKnown RBP9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 ADARP55265 1226 aaKnown RBP9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 HPCAP84074 193 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 WAPLQ7Z5K2 1190 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 INPP5DQ92835 1189 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 LRMDAQ9H2I8 198 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 MLXIPQ9HAP2 919 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 ETNK2Q9NVF9 386 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 TBCCD1Q9NVR7 557 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 KLHL14Q9P2G3 628 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 PPLO60437 1756 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 MYBP10242 640 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 FUT4P22083 530 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 MTTPP55157 894 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 GPSM2P81274 684 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 PDE1BQ01064 536 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 DHX9Q08211 1270 aaKnown RBP9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 SCUBE1Q8IWY4 988 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 FITM2Q8N6M3 262 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 DDX21Q9NR30 783 aaKnown RBP eCLIP9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 NDUFA13Q9P0J0 144 aa9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 FBXO2Q9UK22 296 aaPredicted RBP9.26□□□□□ -0.93
SRGAP1-202ENST00000537556 HTR3EA5X5Y0 456 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 BTBD19C9JJ37 291 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 EEF1GP26641 437 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 CCNFP41002 786 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 NEK2P51955 445 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 RASSF7Q02833 373 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 NEXNQ0ZGT2 675 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 CYLC2Q14093 348 aaPredicted RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 DDB1Q16531 1140 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 EFCAB2Q5VUJ9 269 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 OLFML2BQ68BL8 750 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 CHST3Q7LGC8 479 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SPATA24Q86W54 205 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 STK11IPQ8N1F8 1099 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 PDCD7Q8N8D1 485 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TBC1D16Q8TBP0 767 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SCG3Q8WXD2 468 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 AGBL1Q96MI9 1066 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SIKE1Q9BRV8 207 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 EIF2AQ9BY44 585 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 NRDE2Q9H7Z3 1164 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 DLC1Q96QB1 1528 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 MLH3Q9UHC1 1453 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 NPATQ14207 1427 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SIGLEC16A6NMB1 481 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 H0Y3Z8 333 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 NCK2O43639 380 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 ECE2O60344 883 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 ZFYP08048 801 aaPredicted RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 ECHS1P30084 290 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 AFMP43652 599 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 ERVK-9P63128 1117 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 GSTM4Q03013 218 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 R3HDM1Q15032 1099 aaKnown RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TAF7Q15545 349 aaPredicted RBP9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TRADDQ15628 312 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 SNX30Q5VWJ9 437 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 CCDC174Q6PII3 467 aa9.25□□□□□ -0.93
SRGAP1-202ENST00000537556 TAOK1Q7L7X3 1001 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms