RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 POTEGQ6S5H5 508 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 POTEEQ6S8J3 1075 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 ZFPM1Q8IX07 1006 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 CCDC17Q96LX7 622 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 DNAJC18Q9H819 358 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 LUC7LQ9NQ29 371 aaKnown RBP15.77■□□□□ 0.12
USP44-203ENST00000537435 STIM2Q9P246 746 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 LCMT1Q9UIC8 334 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 TSKSQ9UJT2 592 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 FAM196BA6NMK8 535 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 PALMO75781 387 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 KLRC1P26715 233 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 EPS15P42566 896 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 ENOX2Q16206 610 aaKnown RBP15.77■□□□□ 0.11
USP44-203ENST00000537435 SLC18A3Q16572 532 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 SHROOM1Q2M3G4 852 aaPredicted RBP15.77■□□□□ 0.11
USP44-203ENST00000537435 C8orf74Q6P047 294 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 ZC3H3Q8IXZ2 948 aaKnown RBP15.77■□□□□ 0.11
USP44-203ENST00000537435 FAM133AQ8N9E0 248 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 TEKT1Q969V4 418 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.77■□□□□ 0.11
USP44-203ENST00000537435 TRIM34Q9BYJ4 488 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 DHX36Q9H2U1 1008 aaKnown RBP15.77■□□□□ 0.11
USP44-203ENST00000537435 LTBP1Q14766 1721 aa15.77■□□□□ 0.11
USP44-203ENST00000537435 CYP3A7-CYP3A51PA0A087WV96 503 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 FRMD3A2A2Y4 597 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 CETN3O15182 167 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 EEF2P13639 858 aaKnown RBP15.76■□□□□ 0.11
USP44-203ENST00000537435 CYP3A7P24462 503 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 KLHL30Q0D2K2 578 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 CFAP221Q4G0U5 840 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 HHIPL2Q6UWX4 724 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 SRLQ86TD4 932 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 SLFN12Q8IYM2 578 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 GJD4Q96KN9 370 aaPredicted RBP15.76■□□□□ 0.11
USP44-203ENST00000537435 PITPNM2Q9BZ72 1349 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 A0A087X0T9 212 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 SLC26A4O43511 780 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 FTCDO95954 541 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 FAM228BP0C875 321 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 DNA2P51530 1060 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 CASP5P51878 434 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 EPHB4P54760 987 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 KCNH2Q12809 1159 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 NAB2Q15742 525 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 EDRF1Q3B7T1 1238 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 SLFN13Q68D06 897 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 MBOAT7Q96N66 472 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 EHD4Q9H223 541 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 GANQ9H2C0 597 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 ADAMTS1Q9UHI8 967 aa15.76■□□□□ 0.11
USP44-203ENST00000537435 MEIS2O14770 477 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 NR2F2P24468 414 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 ARHGAP4P98171 946 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 ASIC2Q16515 512 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 PRR16Q569H4 304 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 PPP4R3CPQ6ZMV5 832 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 CATSPER3Q86XQ3 398 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
USP44-203ENST00000537435 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 UBR3Q6ZT12 1888 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 GOLGA6CA6NDK9 693 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 MYO1CO00159 1063 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 MEIS1O00470 390 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 GOLGA6DP0CG33 693 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 CACNB3P54284 484 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 PSMC6P62333 389 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 AP3B2Q13367 1082 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 KIAA0753Q2KHM9 967 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 FAM76AQ8TAV0 307 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 ETNPPLQ8TBG4 499 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 DCAF4Q8WV16 495 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 ZFP91Q96JP5 570 aaPredicted RBP15.75■□□□□ 0.11
USP44-203ENST00000537435 PACSIN1Q9BY11 444 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 GOLGA6AQ9NYA3 693 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 RNF14Q9UBS8 474 aa15.75■□□□□ 0.11
USP44-203ENST00000537435 RRP15Q9Y3B9 282 aaKnown RBP15.75■□□□□ 0.11
USP44-203ENST00000537435 CRKP46108 304 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 SNAP25P60880 206 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 SPIRE1Q08AE8 756 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 TCP10Q12799 353 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 PABPC4Q13310 644 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP44-203ENST00000537435 GIT2Q14161 759 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 GLE1Q53GS7 698 aaKnown RBP15.74■□□□□ 0.11
USP44-203ENST00000537435 EMBQ6PCB8 327 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 MOXD1Q6UVY6 613 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 MKL1Q969V6 931 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 FEZ2Q9UHY8 353 aaPredicted RBP15.74■□□□□ 0.11
USP44-203ENST00000537435 HDAC9Q9UKV0 1011 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 LRRC37AA6NMS7 1700 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 G3V3G9 751 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 ACTN1P12814 892 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 TNFRSF8P28908 595 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 CERKLQ49MI3 558 aaPredicted RBP15.74■□□□□ 0.11
USP44-203ENST00000537435 DCAF8Q5TAQ9 597 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 TSEN2Q8NCE0 465 aaKnown RBP15.74■□□□□ 0.11
USP44-203ENST00000537435 CRYGNQ8WXF5 182 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 NYAP2Q9P242 653 aa15.74■□□□□ 0.11
USP44-203ENST00000537435 PACSIN2Q9UNF0 486 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms