RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 NFKB1P19838 968 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 CYP2B6P20813 491 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 RGS2P41220 211 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 PDE4BQ07343 736 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 PPARAQ07869 468 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 NMIQ13287 307 aaPredicted RBP8.34□□□□□ -1.07
YBX3-206ENST00000536823 ALX1Q15699 326 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 VPS53Q5VIR6 699 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 U2AF1L4Q8WU68 220 aaKnown RBP8.34□□□□□ -1.07
YBX3-206ENST00000536823 ATG4CQ96DT6 458 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 FAM227BQ96M60 508 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 MOV10L1Q9BXT6 1211 aaKnown RBP8.34□□□□□ -1.07
YBX3-206ENST00000536823 SPATC1LQ9H0A9 340 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.34□□□□□ -1.07
YBX3-206ENST00000536823 PAK6Q9NQU5 681 aaPredicted RBP8.34□□□□□ -1.07
YBX3-206ENST00000536823 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 SYNPO2Q9UMS6 1093 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.34□□□□□ -1.07
YBX3-206ENST00000536823 RAXQ9Y2V3 346 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
YBX3-206ENST00000536823 COL11A1P12107 1806 aaPredicted RBP8.33□□□□□ -1.08
YBX3-206ENST00000536823 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 CCDC171Q6TFL3 1326 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 SLC15A5A6NIM6 579 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 NDUFB10O96000 172 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 HOXC6P09630 235 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 CAPN2P17655 700 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
YBX3-206ENST00000536823 IRX6P78412 446 aaPredicted RBP8.33□□□□□ -1.08
YBX3-206ENST00000536823 GRB14Q14449 540 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 MCMDC2Q4G0Z9 681 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 FAM83BQ5T0W9 1011 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 WDR78Q5VTH9 848 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 BTLAQ7Z6A9 289 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 UBE2Q1Q7Z7E8 422 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 ZNF589Q86UQ0 364 aaPredicted RBP8.33□□□□□ -1.08
YBX3-206ENST00000536823 ZNF444Q8N0Y2 327 aaPredicted RBP8.33□□□□□ -1.08
YBX3-206ENST00000536823 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 RILPL2Q969X0 211 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 CEP95Q96GE4 821 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 GSX2Q9BZM3 304 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 FBXO28Q9NVF7 368 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 MTMR4Q9NYA4 1195 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 ANAPC4Q9UJX5 808 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 PPP1R9AQ9ULJ8 1098 aa8.33□□□□□ -1.08
YBX3-206ENST00000536823 RPTORQ8N122 1335 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 LAMA4Q16363 1823 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 DLL1O00548 723 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 ORC4O43929 436 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 FARP2O94887 1054 aaPredicted RBP8.32□□□□□ -1.08
YBX3-206ENST00000536823 SGPL1O95470 568 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 BRD1O95696 1058 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 TTLL1O95922 423 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 TSPY3P0CV98 308 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 TSPY8P0CW00 308 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 HSPD1P10809 573 aaKnown RBP8.32□□□□□ -1.08
YBX3-206ENST00000536823 ERCC3P19447 782 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 SPINK2P20155 84 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 MFAP1P55081 439 aaKnown RBP8.32□□□□□ -1.08
YBX3-206ENST00000536823 DPYDQ12882 1025 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 TMEM132BQ14DG7 1078 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 PCSK7Q16549 785 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 CCL14Q16627 93 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 FAM47AQ5JRC9 791 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 GMCL1P1Q8NEA9 526 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 MKL1Q969V6 931 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 DEFB118Q96PH6 123 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 NUP88Q99567 741 aaPredicted RBP8.32□□□□□ -1.08
YBX3-206ENST00000536823 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
YBX3-206ENST00000536823 CLIP2Q9UDT6 1046 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 ADAMTS5Q9UNA0 930 aa8.32□□□□□ -1.08
YBX3-206ENST00000536823 TSPY2A6NKD2 308 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 F5H6K3 240 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 F8W735 103 aaPredicted RBP8.31□□□□□ -1.08
YBX3-206ENST00000536823 HIP1O00291 1037 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 VWA5AO00534 786 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 STRNO43815 780 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 SLC25A27O95847 323 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 FGAP02671 866 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 SDSP20132 328 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 ADORA2AP29274 412 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 COPB2P35606 906 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 TFAP4Q01664 338 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 PLAURQ03405 335 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 KLRC3Q07444 240 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
YBX3-206ENST00000536823 PLS1Q14651 629 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 SWI5Q1ZZU3 235 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 ABRAQ8N0Z2 381 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 LRRC47Q8N1G4 583 aaKnown RBP8.31□□□□□ -1.08
YBX3-206ENST00000536823 REPS2Q8NFH8 660 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 SLF1Q9BQI6 1058 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 MROH8Q9H579 483 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
YBX3-206ENST00000536823 ZNF214Q9UL59 606 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms