RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 MARK3P27448 753 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 PSMA5P28066 241 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 HOXC8P31273 242 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 DEFB103AP81534 67 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 CYP2W1Q8TAV3 490 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 TLL1O43897 1013 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 LGR5O75473 907 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 FOSP01100 380 aaPredicted RBP16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 SCG2P13521 617 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 IKBKEQ14164 716 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 CCDC85BQ15834 202 aaPredicted RBP16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 GLG1Q92896 1179 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 ZBED2Q9BTP6 218 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 KCNH7Q9NS40 1196 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.2
RTN3P1-201ENST00000536295 UNC80Q8N2C7 3258 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 ABHD14A-ACY1A0A1B0GW23 586 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 MAFGO15525 162 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 ARHGEF15O94989 841 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 ARP10275 920 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 ZNF76P36508 570 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 FAM117BQ6P1L5 589 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 DBF4BQ8NFT6 615 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 PHKBQ93100 1093 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 JPH1Q9HDC5 661 aaPredicted RBP16.32■□□□□ 0.2
RTN3P1-201ENST00000536295 NRCAMQ92823 1304 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 RFXAPO00287 272 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 SREBF1P36956 1147 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 CLK2P49760 499 aaKnown RBP16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 AKAP17AQ02040 695 aaKnown RBP16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 PPFIA1Q13136 1202 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 ERAP1Q9NZ08 941 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 A0A0C4DFX4 3053 aa16.31■□□□□ 0.2
RTN3P1-201ENST00000536295 NID2Q14112 1375 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 LCHNA4D1U4 455 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 ADAMTS3O15072 1205 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 PRPF3O43395 683 aaKnown RBP16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 IGBP1P78318 339 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 ADAM17P78536 824 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 TAP1Q03518 808 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 GRIK4Q16099 956 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 PKN1Q16512 942 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 RUFY4Q6ZNE9 571 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 RUFY3Q7L099 469 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 TEX2Q8IWB9 1127 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 UIMC1Q96RL1 719 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 COL25A1Q9BXS0 654 aaPredicted RBP16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 AGXT2Q9BYV1 514 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 OSBPL7Q9BZF2 842 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 SMARCAD1Q9H4L7 1026 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 NCOA5Q9HCD5 579 aaKnown RBP16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 AGO4Q9HCK5 861 aaKnown RBP16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
RTN3P1-201ENST00000536295 PTPRSQ13332 1948 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 EFCAB14O75071 495 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 CAND2O75155 1236 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 PDIA3P30101 505 aaKnown RBP16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 ACTR2P61160 394 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 ITGB3BPQ13352 177 aaPredicted RBP16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 CCDC12Q8WUD4 166 aaPredicted RBP16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 SEPT8Q92599 483 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 PCYT2Q99447 389 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 AZI2Q9H6S1 392 aa16.29■□□□□ 0.2
RTN3P1-201ENST00000536295 MYO9BQ13459 2157 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 NFASCO94856 1347 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 MEIS1O00470 390 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 GJB5O95377 273 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 AMHP03971 560 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 TOB2Q14106 344 aaPredicted RBP16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 NTRK3Q16288 839 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 PLEKHG4Q58EX7 1191 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 PLA2G4DQ86XP0 818 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
RTN3P1-201ENST00000536295 ZBTB10Q96DT7 871 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms