RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 TNIP1Q15025 636 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 TBC1D10BQ4KMP7 808 aaPredicted RBP5.44□□□□□ -1.54
YBX3-205ENST00000536107 EDC4Q6P2E9 1401 aaKnown RBP5.44□□□□□ -1.54
YBX3-205ENST00000536107 FAM161BQ96MY7 647 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 SMPD4Q9NXE4 827 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 ZNRF3Q9ULT6 936 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 ITGB4P16144 1822 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 SPTBN5Q9NRC6 3674 aaKnown RBP5.43□□□□□ -1.54
YBX3-205ENST00000536107 DLEC1Q9Y238 1755 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 UBE2Q2LH0YL09 131 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 TMEM62Q0P6H9 643 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 ARHGEF6Q15052 776 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 SLC14A2Q15849 920 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 RNF141Q8WVD5 230 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 CDCA5Q96FF9 252 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 KLHL14Q9P2G3 628 aa5.43□□□□□ -1.54
YBX3-205ENST00000536107 SCN11AQ9UI33 1791 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 SLX4Q8IY92 1834 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 SHTN1A0MZ66 631 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 BUB1BO60566 1050 aaPredicted RBP5.42□□□□□ -1.54
YBX3-205ENST00000536107 LRRN2O75325 713 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 MPOP05164 745 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 SDHBP21912 280 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 FKBP1BP68106 108 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 TCIRG1Q13488 830 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 CPZQ66K79 652 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 ZNF530Q6P9A1 599 aaPredicted RBP5.42□□□□□ -1.54
YBX3-205ENST00000536107 CEP128Q6ZU80 1094 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 TMC6Q7Z403 805 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 FERMT3Q86UX7 667 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 MAFAQ8NHW3 353 aaPredicted RBP5.42□□□□□ -1.54
YBX3-205ENST00000536107 SH3TC2Q8TF17 1288 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 CYB5D2Q8WUJ1 264 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 MAP6Q96JE9 813 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 C1QTNF3Q9BXJ4 246 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 USP40Q9NVE5 1235 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 ADAM30Q9UKF2 790 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 CDHR2Q9BYE9 1310 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 PAPPA2Q9BXP8 1791 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 A0A1W2PP64 1363 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 FLT4P35916 1363 aa5.42□□□□□ -1.54
YBX3-205ENST00000536107 LAMA3Q16787 3333 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 PNMA6FA0A0J9YX94 578 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 SHISA3A0PJX4 238 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 STARD3NLO95772 234 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 ITGB3P05106 788 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 SP3Q02447 781 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 PDE4BQ07343 736 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 ENOX2Q16206 610 aaKnown RBP5.41□□□□□ -1.54
YBX3-205ENST00000536107 PLEKHO1Q53GL0 409 aaPredicted RBP5.41□□□□□ -1.54
YBX3-205ENST00000536107 C1orf141Q5JVX7 400 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 B4GALNT3Q6L9W6 998 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 RNF111Q6ZNA4 994 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 MOB2Q70IA6 237 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 RPGRQ92834 1020 aaKnown RBP5.41□□□□□ -1.54
YBX3-205ENST00000536107 ACSF2Q96CM8 615 aaPredicted RBP5.41□□□□□ -1.54
YBX3-205ENST00000536107 GUCD1Q96NT3 240 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 SCAND2PQ9GZW5 306 aaPredicted RBP5.41□□□□□ -1.54
YBX3-205ENST00000536107 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 ZMYM5Q9UJ78 669 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 PTCH2Q9Y6C5 1203 aa5.41□□□□□ -1.54
YBX3-205ENST00000536107 KIAA0100Q14667 2235 aaKnown RBP5.41□□□□□ -1.54
YBX3-205ENST00000536107 AKAP11Q9UKA4 1901 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 CENPFP49454 3210 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 MON2Q7Z3U7 1717 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 RGPD2P0DJD1 1756 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 AFDNP55196 1824 aaKnown RBP5.4□□□□□ -1.54
YBX3-205ENST00000536107 PRAMEF22A3QJZ6 481 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 CARNS1A5YM72 827 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 RPL10P27635 214 aaKnown RBP5.4□□□□□ -1.54
YBX3-205ENST00000536107 TNNT2P45379 298 aaPredicted RBP5.4□□□□□ -1.54
YBX3-205ENST00000536107 LRIT3Q3SXY7 679 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 SV2BQ7L1I2 683 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 SUPT20HQ8NEM7 779 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 P2RX7Q99572 595 aaKnown RBP5.4□□□□□ -1.54
YBX3-205ENST00000536107 MRIQ9BWK5 157 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 OSBPL7Q9BZF2 842 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 GGA3Q9NZ52 723 aa5.4□□□□□ -1.54
YBX3-205ENST00000536107 TONSLQ96HA7 1378 aa5.4□□□□□ -1.55
YBX3-205ENST00000536107 HTTP42858 3142 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 MYH14Q7Z406 1995 aaKnown RBP5.39□□□□□ -1.55
YBX3-205ENST00000536107 GIPC1O14908 333 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 IGFBP6P24592 240 aaPredicted RBP5.39□□□□□ -1.55
YBX3-205ENST00000536107 BMP8BP34820 402 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 GDF5P43026 501 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 EIF5P55010 431 aaKnown RBP5.39□□□□□ -1.55
YBX3-205ENST00000536107 SLC39A6Q13433 755 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 CLEC16AQ2KHT3 1053 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 OTUD7BQ6GQQ9 843 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 TDHQ8IZJ6 230 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 RBM15Q96T37 977 aaKnown RBP eCLIP5.39□□□□□ -1.55
YBX3-205ENST00000536107 PLCD4Q9BRC7 762 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 C1QTNF1Q9BXJ1 281 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 ZMYND8Q9ULU4 1186 aaPredicted RBP5.39□□□□□ -1.55
YBX3-205ENST00000536107 COL4A5P29400 1685 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 COL5A3P25940 1745 aaPredicted RBP5.39□□□□□ -1.55
YBX3-205ENST00000536107 NRXN2Q9P2S2 1712 aa5.39□□□□□ -1.55
YBX3-205ENST00000536107 RAB3GAP2Q9H2M9 1393 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms