RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 C1orf131Q8NDD1 294 aaKnown RBP17.14■□□□□ 0.33
TPBG-202ENST00000535040 RAD54LQ92698 747 aa17.14■□□□□ 0.33
TPBG-202ENST00000535040 TMEM260Q9NX78 707 aa17.14■□□□□ 0.33
TPBG-202ENST00000535040 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
TPBG-202ENST00000535040 COL11A2P13942 1736 aaPredicted RBP17.13■□□□□ 0.33
TPBG-202ENST00000535040 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 MEFVO15553 781 aaPredicted RBP17.13■□□□□ 0.33
TPBG-202ENST00000535040 NR1D1P20393 614 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 SFMBT2Q5VUG0 894 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 NAA35Q5VZE5 725 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
TPBG-202ENST00000535040 RIC8AQ9NPQ8 531 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 EDIL3O43854 480 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 DNA2P51530 1060 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 CDC37Q16543 378 aaPredicted RBP17.13■□□□□ 0.33
TPBG-202ENST00000535040 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 DDX12PQ92771 950 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
TPBG-202ENST00000535040 FSBPO95073 299 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 MYBP10242 640 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 CALCRLQ16602 461 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 PTGISQ16647 500 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 ATP6V1G3Q96LB4 118 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 NUDT12Q9BQG2 462 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 NUCKS1Q9H1E3 243 aaKnown RBP17.12■□□□□ 0.33
TPBG-202ENST00000535040 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
TPBG-202ENST00000535040 PACSIN2Q9UNF0 486 aaPredicted RBP17.12■□□□□ 0.33
TPBG-202ENST00000535040 CAPN7Q9Y6W3 813 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 SLC37A4O43826 429 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 PSMD2Q13200 908 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 TSG101Q99816 390 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 PPP1R37O75864 691 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 CCDC125Q86Z20 511 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
TPBG-202ENST00000535040 ZNF473Q8WTR7 871 aaKnown RBP17.12■□□□□ 0.33
TPBG-202ENST00000535040 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
TPBG-202ENST00000535040 DDX60LQ5H9U9 1706 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 POTEMA6NI47 508 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 RAD51CO43502 376 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 HSPA9P38646 679 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 SLC18A3Q16572 532 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 TMEM119Q4V9L6 283 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 SOGA3Q5TF21 947 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 CDK5RAP3Q96JB5 506 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 LSM14BQ9BX40 385 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 TMEM59LQ9UK28 342 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 HOXA7P31268 230 aaPredicted RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 ITGB3BPQ13352 177 aaPredicted RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 GRIK5Q16478 980 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 SPTY2D1Q68D10 685 aaPredicted RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 YTHDF3Q7Z739 585 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 TBC1D5Q92609 795 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 PIGSQ96S52 555 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 KIAA0754O94854 1291 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 MDH1P40925 334 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
TPBG-202ENST00000535040 USP38Q8NB14 1042 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 PACSIN1Q9BY11 444 aa17.11■□□□□ 0.33
TPBG-202ENST00000535040 A0A087X0T9 212 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 ESYT2A0FGR8 921 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 HMGB1P1B2RPK0 211 aaPredicted RBP17.1■□□□□ 0.33
TPBG-202ENST00000535040 MYO1FO00160 1098 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 FAM228BP0C875 321 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 GTF2IP78347 998 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 DIXDC1Q155Q3 683 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 MYOCDQ8IZQ8 938 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 DNAJC19Q96DA6 116 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 NCAPGQ9BPX3 1015 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 TDP2O95551 362 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 RNASE9P60153 205 aaKnown RBP17.1■□□□□ 0.33
TPBG-202ENST00000535040 FKBP3Q00688 224 aaKnown RBP17.1■□□□□ 0.33
TPBG-202ENST00000535040 STYK1Q6J9G0 422 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 MYCBPAPQ8TBZ2 947 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 CNKSR1Q969H4 720 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 CCT8L2Q96SF2 557 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 VAT1LQ9HCJ6 419 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 LUC7LQ9NQ29 371 aaKnown RBP17.1■□□□□ 0.33
TPBG-202ENST00000535040 PLAAQ9Y263 795 aa17.1■□□□□ 0.33
TPBG-202ENST00000535040 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 F8W031 263 aaPredicted RBP17.09■□□□□ 0.33
TPBG-202ENST00000535040 C21orf2O43822 256 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 ECHS1P30084 290 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 SEC24CP53992 1094 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 COASYQ13057 564 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 PDIA5Q14554 519 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 ECM1Q16610 540 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 TMEM266Q2M3C6 531 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 NLRP14Q86W24 1093 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 SNX29Q8TEQ0 813 aa17.09■□□□□ 0.33
TPBG-202ENST00000535040 SEC63Q9UGP8 760 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms