RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 ZNF500O60304 480 aaPredicted RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CILPO75339 1184 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CASTP20810 708 aaKnown RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DAB2P98082 770 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 OS9Q13438 667 aaPredicted RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TOB2Q14106 344 aaPredicted RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TNNI3KQ59H18 835 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 IRF2BP1Q8IU81 584 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PLBD2Q8NHP8 589 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 JAKMIP1Q96N16 626 aaKnown RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 MYD88Q99836 296 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TRAIPQ9BWF2 469 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CCDC8Q9H0W5 538 aaPredicted RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PDRG1Q9NUG6 133 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TPCN1Q9ULQ1 816 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CYP46A1Q9Y6A2 500 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TAF6LQ9Y6J9 622 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FPGT-TNNI3KV9GXZ4 949 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TNKS1BP1Q9C0C2 1729 aaKnown RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NHSL1Q5SYE7 1610 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NWD2Q9ULI1 1742 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FAM221AA4D161 298 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ERVV-2B6SEH9 535 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NUAK1O60285 661 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LRRN2O75325 713 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 OFD1O75665 1012 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ATF3P18847 181 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 RPS6KB1P23443 525 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 MCM5P33992 734 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TERF1P54274 439 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LINC00310P59036 64 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 UBE2HP62256 183 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LMNB2Q03252 620 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NEXNQ0ZGT2 675 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CAMK2GQ13555 558 aaPredicted RBP6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NR0B2Q15466 257 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TIGD5Q53EQ6 642 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CCDC183Q5T5S1 534 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TTLL10Q6ZVT0 673 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NOL8Q76FK4 1167 aaKnown RBP6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ATG9AQ7Z3C6 839 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZNF589Q86UQ0 364 aaPredicted RBP6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 GATAD2BQ8WXI9 593 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DDX17Q92841 729 aaKnown RBP6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 HAUS7Q99871 368 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TSPY26PQ9H489 355 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 REV1Q9UBZ9 1251 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 RAPGEFL1Q9UHV5 662 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SMC3Q9UQE7 1217 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CNPY2Q9Y2B0 182 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ELP1O95163 1332 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 WDR17Q8IZU2 1322 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SH3TC1Q8TE82 1336 aa6.99□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LRP6O75581 1613 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ANKRD36CQ5JPF3 1778 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CTSHP09668 335 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 MYL6BP14649 208 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NCLP19338 710 aaKnown RBP6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PSMA5P28066 241 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 GJB2P29033 226 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TFCP2Q12800 502 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 AIMP1Q12904 312 aaKnown RBP6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SPPL2CQ8IUH8 684 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CCDC83Q8IWF9 413 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FAM184AQ8NB25 1140 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 KLHDC4Q8TBB5 520 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SYAP1Q96A49 352 aaPredicted RBP6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 KREMEN1Q96MU8 473 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ISCA1Q9BUE6 129 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ASPNQ9BXN1 380 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 AGXT2Q9BYV1 514 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 BOLA2Q9H3K6 86 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 KLHL3Q9UH77 587 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZKSCAN5Q9Y2L8 839 aa6.98□□□□□ -1.29
TNFRSF1A-206ENST00000535038 MYH7P12883 1935 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 AKAP11Q9UKA4 1901 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PLCH1Q4KWH8 1693 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ITGB4P16144 1822 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CIAO1O76071 339 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LETM1O95202 739 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PF4P02776 101 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZKSCAN1P17029 563 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CHRNEQ04844 493 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DUSP4Q13115 394 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ANKRD1Q15327 319 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 RBM43Q6ZSC3 357 aaKnown RBP6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 BRINP3Q76B58 766 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SND1Q7KZF4 910 aaKnown RBP eCLIP6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZNF605Q86T29 641 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FBXL16Q8N461 479 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SMARCC2Q8TAQ2 1214 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 BAHD1Q8TBE0 780 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TRIM44Q96DX7 344 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CCDC74BQ96LY2 380 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FSD1Q9BTV5 496 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 KRTAP4-2Q9BYR5 136 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ATP6V1DQ9Y5K8 247 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LRP5O75197 1615 aa6.97□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PCDH11XQ9BZA7 1347 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms