RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SP2Q02086 613 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 SPIRE1Q08AE8 756 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 PPP2R5CQ13362 524 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 NEDD9Q14511 834 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 TMEM266Q2M3C6 531 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 AK8Q96MA6 479 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 TEKT3Q9BXF9 490 aa13.81□□□□□ -0.2
SCARB1-204ENST00000535005 A0A1W2PQ27 194 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 A0A1W2PQ64 194 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 A0A1W2PQD8 194 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 VWA3AA6NCI4 1184 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 GAS7O60861 476 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
SCARB1-204ENST00000535005 ARIH2O95376 493 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 HMGCRP04035 888 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 UBA1P22314 1058 aaKnown RBP13.8□□□□□ -0.2
SCARB1-204ENST00000535005 MAP3K21Q5TCX8 1036 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 GJA10Q969M2 543 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 SDF4Q9BRK5 362 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 RAB34Q9BZG1 259 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
SCARB1-204ENST00000535005 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 NKRFO15226 690 aaKnown RBP eCLIP13.8□□□□□ -0.25e-7■□□□□ 9.1
SCARB1-204ENST00000535005 TXNP10599 105 aaKnown RBP13.8□□□□□ -0.2
SCARB1-204ENST00000535005 CYBAP13498 195 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 ELNP15502 786 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 TECP42680 631 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 GRIN1Q05586 938 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 CCDC144BQ3MJ40 725 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 PRAMEF19Q5SWL8 479 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 CLIC6Q96NY7 704 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 CSRNP2Q9H175 543 aa13.8□□□□□ -0.2
SCARB1-204ENST00000535005 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 CMA1P23946 247 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 ADCYAP1R1P41586 468 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 LBX1P52954 281 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 KRT76Q01546 638 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 CACNB2Q08289 660 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-204ENST00000535005 LY6KQ17RY6 165 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
SCARB1-204ENST00000535005 ZNF746Q6NUN9 644 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-204ENST00000535005 METTL7BQ6UX53 244 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 CTU1Q7Z7A3 348 aaKnown RBP13.79□□□□□ -0.2
SCARB1-204ENST00000535005 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 EMID1Q96A84 441 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-204ENST00000535005 UIMC1Q96RL1 719 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 PKD2L1Q9P0L9 805 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 FAM184BQ9ULE4 1060 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 PTCH2Q9Y6C5 1203 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
SCARB1-204ENST00000535005 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 SLC26A4O43511 780 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-204ENST00000535005 GRK4P32298 578 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 TNFAIP2Q03169 654 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 SHC4Q6S5L8 630 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-204ENST00000535005 RDM1Q8NG50 284 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 UNC45AQ9H3U1 944 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 JPH1Q9HDC5 661 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-204ENST00000535005 SLC9A2Q9UBY0 812 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 LRWD1Q9UFC0 647 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 Q9Y3F1 56 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 GOLGA6L4A6NEF3 574 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 GGPS1O95749 300 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 CCNE2O96020 404 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 GH1P01241 217 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 SMPD1P17405 629 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 SFNP31947 248 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 FAM193AP78312 1265 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 GABPB1Q06547 395 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-204ENST00000535005 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 TRIM32Q13049 653 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 LAMC2Q13753 1193 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 EPHA7Q15375 998 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 RESP18Q5W5W9 173 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 CYFIP1Q7L576 1253 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 DHX37Q8IY37 1157 aaKnown RBP13.78□□□□□ -0.2
SCARB1-204ENST00000535005 CCSER1Q9C0I3 900 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 TCEAL9Q9UHQ7 104 aa13.78□□□□□ -0.2
SCARB1-204ENST00000535005 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
SCARB1-204ENST00000535005 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.77□□□□□ -0.21
SCARB1-204ENST00000535005 POTEMA6NI47 508 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 WDR64B1ANS9 1081 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 EML1O00423 815 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 ATG7O95352 703 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 CAVIN2O95810 425 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
SCARB1-204ENST00000535005 AKR1A1P14550 325 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 JAK3P52333 1124 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 PKN2Q16513 984 aaKnown RBP13.77□□□□□ -0.21
SCARB1-204ENST00000535005 TMEM63BQ5T3F8 832 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 MLXIPQ9HAP2 919 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 OGFRQ9NZT2 677 aa13.77□□□□□ -0.21
SCARB1-204ENST00000535005 SMTNL1A8MU46 457 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 SEPT4O43236 478 aa13.76□□□□□ -0.21
SCARB1-204ENST00000535005 INHAP05111 366 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms