RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SOX11P35716 441 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 EXOSC10Q01780 885 aaKnown RBP10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 APOBRQ0VD83 1088 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 PGM5Q15124 567 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 RTN1Q16799 776 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 C1orf53Q5VUE5 145 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 APOA5Q6Q788 366 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 BLOC1S2Q6QNY1 142 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 Q6ZUG5 572 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 IL31RAQ8NI17 732 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 GPKOWQ92917 476 aaPredicted RBP eCLIP10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 MAP3K14Q99558 947 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 TRPV6Q9H1D0 765 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 IL21Q9HBE4 155 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 RTEL1Q9NZ71 1219 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 Q9Y3F1 56 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 MROH7Q68CQ1 1323 aa10.29□□□□□ -0.76
CCDC90B-219ENST00000534753 NKRFO15226 690 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 PPFIA3O75145 1194 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 S1PR4O95977 384 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 GH1P01241 217 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 HMGB1P09429 215 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 CASTP20810 708 aaKnown RBP10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 CCND2P30279 289 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 HSPA4P34932 840 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 UBE2SQ16763 222 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 NYAP1Q6ZVC0 841 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 TMTC3Q6ZXV5 915 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 ANKRD33Q7Z3H0 272 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 SGMS1Q86VZ5 419 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 AFG1LQ8WV93 481 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 BRF1Q92994 677 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 PBXIP1Q96AQ6 731 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 PDCD2LQ9BRP1 358 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 MTG1Q9BT17 334 aaPredicted RBP10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 SLC6A16Q9GZN6 736 aa10.28□□□□□ -0.76
CCDC90B-219ENST00000534753 A0A1W2PPC1 479 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 KIAA0355O15063 1070 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 CYP2C18P33260 490 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 METAP2P50579 478 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 CDK7P50613 346 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 PURAQ00577 322 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 FPGSQ05932 587 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 SHHQ15465 462 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 NBPF20Q3BBV1 942 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 C9orf50Q5SZB4 431 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 CCDC62Q6P9F0 684 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 DHX37Q8IY37 1157 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 MAF1Q9H063 256 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 PSTPIP2Q9H939 334 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 RBM28Q9NW13 759 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 MAP3K20Q9NYL2 800 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 V9GY48 417 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 GRIN2DO15399 1336 aa10.27□□□□□ -0.77
CCDC90B-219ENST00000534753 TRIOBPQ9H2D6 2365 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 CARNS1A5YM72 827 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 B4GALT4O60513 344 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 GGPS1O95749 300 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 TIMP1P01033 207 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 ACRP10323 421 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 RPS6KB1P23443 525 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 PSMA5P28066 241 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 SMARCA1P28370 1054 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 CDC27P30260 824 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 ADD1P35611 737 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 EPHB4P54760 987 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 NAPAP54920 295 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 CCL23P55773 120 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 NKX3-2P78367 333 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 SP4Q02446 784 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 ARHGAP1Q07960 439 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 ERICH6BQ5W0A0 696 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 VSIG10LQ86VR7 867 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 FAM126BQ8IXS8 530 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 SAMD3Q8N6K7 520 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 ALG1Q9BT22 464 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 MLXIPQ9HAP2 919 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 TRMT13Q9NUP7 481 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 PKD2L1Q9P0L9 805 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 DDX41Q9UJV9 622 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 NOD1Q9Y239 953 aa10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 MAFBQ9Y5Q3 323 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-219ENST00000534753 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 KPNA6O60684 536 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 RGS20O76081 388 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 MMP3P08254 477 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 ZNF286BP0CG31 522 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 CYP2C9P11712 490 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 CSF2RAP15509 400 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 CCT2P78371 535 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 LAMC2Q13753 1193 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 DGKDQ16760 1214 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 GNPTABQ3T906 1256 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 WWC2Q6AWC2 1192 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 TMEM199Q8N511 208 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 PGBD1Q96JS3 809 aa10.25□□□□□ -0.77
CCDC90B-219ENST00000534753 RNPC3Q96LT9 517 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms