RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SEC23AQ15436 765 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 TARBP2Q15633 366 aaKnown RBP9.1□□□□□ -0.95
CASP4-213ENST00000534356 ZNF648Q5T619 568 aaPredicted RBP9.1□□□□□ -0.95
CASP4-213ENST00000534356 RNF187Q5TA31 235 aaPredicted RBP9.1□□□□□ -0.95
CASP4-213ENST00000534356 LCE3BQ5TA77 95 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 CPZQ66K79 652 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 NXPE1Q8N323 547 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 TTLL11Q8NHH1 800 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 TOE1Q96GM8 510 aaKnown RBP9.1□□□□□ -0.95
CASP4-213ENST00000534356 YIPF4Q9BSR8 244 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 CAAP1Q9H8G2 361 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 SPC25Q9HBM1 224 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 IFT57Q9NWB7 429 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 DTLQ9NZJ0 730 aa9.1□□□□□ -0.95
CASP4-213ENST00000534356 SCRIBQ14160 1630 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 ZNF891A8MT65 544 aaPredicted RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 ACOT7O00154 380 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 SCDO00767 359 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 BUB1BO60566 1050 aaPredicted RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 DNAJC6O75061 913 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 CLASP2O75122 1294 aaKnown RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 LRG1P02750 347 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 KRT1P04264 644 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 YBX3P16989 372 aaKnown RBP eCLIP9.09□□□□□ -0.95
CASP4-213ENST00000534356 PTPN1P18031 435 aaKnown RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 IGFBP6P24592 240 aaPredicted RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 CACNB2Q08289 660 aaPredicted RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 ARHGAP44Q17R89 818 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 PAN2Q504Q3 1202 aaKnown RBP9.09□□□□□ -0.95
CASP4-213ENST00000534356 BTBD8Q5XKL5 378 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 KIF18BQ86Y91 864 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 CHAC2Q8WUX2 184 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 FMNL2Q96PY5 1086 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 RIC8BQ9NVN3 520 aa9.09□□□□□ -0.95
CASP4-213ENST00000534356 EIF4G1Q04637 1599 aaKnown RBP9.08□□□□□ -0.96
CASP4-213ENST00000534356 KRT37O76014 449 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 F2P00734 622 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 C8BP07358 591 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 TMEM253P0C7T8 217 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 PFKLP17858 780 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 CR1LQ2VPA4 569 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 CD300LDQ6UXZ3 194 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 KRT26Q7Z3Y9 468 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 SYT3Q9BQG1 590 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 BOCQ9BWV1 1114 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 TMX1Q9H3N1 280 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 MYO15BQ96JP2 1530 aa9.08□□□□□ -0.96
CASP4-213ENST00000534356 FAHP16930 419 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 GLDCP23378 1020 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 SOX5P35711 763 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 IRF9Q00978 393 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 DSG1Q02413 1049 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 TEPPQ6URK8 271 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 POU5F2Q8N7G0 328 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 SMARCC2Q8TAQ2 1214 aa9.07□□□□□ -0.96
CASP4-213ENST00000534356 ANKRD62A6NC57 917 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 C4BPAP04003 597 aaKnown RBP9.06□□□□□ -0.96
CASP4-213ENST00000534356 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
CASP4-213ENST00000534356 STRA8Q7Z7C7 330 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 B3GNT8Q7Z7M8 397 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 DDX11Q96FC9 970 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 RBPJLQ9UBG7 517 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 ZKSCAN5Q9Y2L8 839 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 B3GALT1Q9Y5Z6 326 aa9.06□□□□□ -0.96
CASP4-213ENST00000534356 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.05□□□□□ -0.96
CASP4-213ENST00000534356 DVL2O14641 736 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 GAS7O60861 476 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 C1QTNF9P0C862 333 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 ATP2A2P16615 1042 aaKnown RBP9.05□□□□□ -0.96
CASP4-213ENST00000534356 CNGA1P29973 690 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 GJA4P35212 333 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 LIMS1P48059 325 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 SCNN1BP51168 640 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 NKX3-2P78367 333 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 FOXO4P98177 505 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 CREB3L3Q68CJ9 461 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 ATG14Q6ZNE5 492 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 ZC3H18Q86VM9 953 aaKnown RBP9.05□□□□□ -0.96
CASP4-213ENST00000534356 TMEFF1Q8IYR6 380 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 DLG3Q92796 817 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 FAM126AQ9BYI3 521 aaPredicted RBP9.05□□□□□ -0.96
CASP4-213ENST00000534356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.05□□□□□ -0.96
CASP4-213ENST00000534356 WASF3Q9UPY6 502 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 FAN1Q9Y2M0 1017 aa9.05□□□□□ -0.96
CASP4-213ENST00000534356 CYP2C8P10632 490 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 CT47A1Q5JQC4 288 aaPredicted RBP9.04□□□□□ -0.96
CASP4-213ENST00000534356 PROSER1Q86XN7 944 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 OR2W6PQ8NHA6 318 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 CHTF18Q8WVB6 975 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 SIGLEC10Q96LC7 697 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 PPP1R16BQ96T49 567 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 SLC38A3Q99624 504 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
CASP4-213ENST00000534356 KCNH7Q9NS40 1196 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 THG1LQ9NWX6 298 aaKnown RBP9.04□□□□□ -0.96
CASP4-213ENST00000534356 HSPBP1Q9NZL4 362 aa9.04□□□□□ -0.96
CASP4-213ENST00000534356 H2AFY2Q9P0M6 372 aaPredicted RBP9.04□□□□□ -0.96
CASP4-213ENST00000534356 PRAMEF25A6NGN4 478 aa9.03□□□□□ -0.96
CASP4-213ENST00000534356 NFIBO00712 420 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms