RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 PCDHA1Q9Y5I3 950 aa10.73□□□□□ -0.69
PACS1-214ENST00000533811 LOXHD1Q8IVV2 1947 aa10.73□□□□□ -0.69
PACS1-214ENST00000533811 SALL3Q9BXA9 1300 aa10.73□□□□□ -0.69
PACS1-214ENST00000533811 TTC3P53804 2025 aa10.73□□□□□ -0.69
PACS1-214ENST00000533811 C5orf67F2Z3F1 127 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 GCOM1H8Y6P7 765 aaPredicted RBP10.72□□□□□ -0.69
PACS1-214ENST00000533811 ST18O60284 1047 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 GFRA3O60609 400 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 MMP1P03956 469 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 POLR2MP0CAP2 368 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 TGFB3P10600 412 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 HOXC8P31273 242 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 MFAP1P55081 439 aaKnown RBP10.72□□□□□ -0.69
PACS1-214ENST00000533811 GNPTABQ3T906 1256 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 PAN2Q504Q3 1202 aaKnown RBP10.72□□□□□ -0.69
PACS1-214ENST00000533811 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 ADGRD2Q7Z7M1 963 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 LMBR1Q8WVP7 490 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 UBAC1Q9BSL1 405 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 USP26Q9BXU7 913 aa10.72□□□□□ -0.69
PACS1-214ENST00000533811 KLRF2D3W0D1 207 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 ZBTB5O15062 677 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 PPP1R11O60927 126 aaPredicted RBP10.71□□□□□ -0.69
PACS1-214ENST00000533811 TRIOO75962 3097 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 CHRNA1P02708 482 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 LINC00271P0C7V0 271 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 RRP1P56182 461 aaKnown RBP10.71□□□□□ -0.69
PACS1-214ENST00000533811 ZXDAP98168 799 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 ADAM15Q13444 863 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 NEDD9Q14511 834 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 FAM26DQ5JW98 314 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.69
PACS1-214ENST00000533811 RUFY4Q6ZNE9 571 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 BMP8AQ7Z5Y6 402 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 RBM23Q86U06 439 aaKnown RBP10.71□□□□□ -0.69
PACS1-214ENST00000533811 FBXL6Q8N531 539 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 GPR20Q99678 358 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 PRRX2Q99811 253 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 RTEL1Q9NZ71 1219 aa10.71□□□□□ -0.69
PACS1-214ENST00000533811 BARX2Q9UMQ3 279 aaPredicted RBP10.71□□□□□ -0.69
PACS1-214ENST00000533811 MRPL42Q9Y6G3 142 aaKnown RBP10.71□□□□□ -0.69
PACS1-214ENST00000533811 PLXNA4Q9HCM2 1894 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 ENPP3O14638 875 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 PPFIA3O75145 1194 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 ITGB1P05556 798 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 MARK3P27448 753 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 NRIP1P48552 1158 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 TCF15Q12870 199 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 LPIN1Q14693 890 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 METTL7BQ6UX53 244 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 RSPH3Q86UC2 560 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 PIBF1Q8WXW3 757 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 ATOH1Q92858 354 aaPredicted RBP10.7□□□□□ -0.7
PACS1-214ENST00000533811 CLP1Q92989 425 aaKnown RBP10.7□□□□□ -0.7
PACS1-214ENST00000533811 MSLNLQ96KJ4 702 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 PIGSQ96S52 555 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 PLVAPQ9BX97 442 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 MAP3K20Q9NYL2 800 aaKnown RBP10.7□□□□□ -0.7
PACS1-214ENST00000533811 ZSWIM5Q9P217 1185 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 PLAGL2Q9UPG8 496 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 USP15Q9Y4E8 981 aaPredicted RBP10.7□□□□□ -0.7
PACS1-214ENST00000533811 TELO2Q9Y4R8 837 aa10.7□□□□□ -0.7
PACS1-214ENST00000533811 EYA4O95677 639 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 DNAJB1P25685 340 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 VCPP55072 806 aaKnown RBP10.69□□□□□ -0.7
PACS1-214ENST00000533811 IGBP1P78318 339 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
PACS1-214ENST00000533811 GHRHRQ02643 423 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 CAMK1Q14012 370 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 PKN1Q16512 942 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 IMMTQ16891 758 aaKnown RBP10.69□□□□□ -0.7
PACS1-214ENST00000533811 SPOUT1Q5T280 376 aaKnown RBP10.69□□□□□ -0.7
PACS1-214ENST00000533811 CWC27Q6UX04 472 aaKnown RBP10.69□□□□□ -0.7
PACS1-214ENST00000533811 SAMD3Q8N6K7 520 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 EFHBQ8N7U6 833 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 KLHL23Q8NBE8 558 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 SMRP1Q8NCR6 262 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 MICAL1Q8TDZ2 1067 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 POF1BQ8WVV4 589 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 DNAJB3Q8WWF6 145 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 KRT23Q9C075 422 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 RC3H2Q9HBD1 1191 aaKnown RBP10.69□□□□□ -0.7
PACS1-214ENST00000533811 CLEC1BQ9P126 229 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 PCDHGC5Q9Y5F6 944 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 CDY2AQ9Y6F7 541 aa10.69□□□□□ -0.7
PACS1-214ENST00000533811 NRCAMQ92823 1304 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 SPATA31C2B4DYI2 1134 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 LOC730098B7Z3J9 87 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 FIBPO43427 364 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 DGKIO75912 1065 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 CENPBP07199 599 aaPredicted RBP10.68□□□□□ -0.7
PACS1-214ENST00000533811 SDSP20132 328 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 SP100P23497 879 aaPredicted RBP10.68□□□□□ -0.7
PACS1-214ENST00000533811 CD52P31358 61 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 ICAM3P32942 547 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 GATMP50440 423 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 ADAM17P78536 824 aa10.68□□□□□ -0.7
PACS1-214ENST00000533811 SIGLEC14Q08ET2 396 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms