RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MAGOHBQ96A72 148 aaKnown RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 COA1Q9GZY4 146 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 COMMD10Q9Y6G5 202 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 ESYT3A0FGR9 886 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 AFPP02771 609 aaKnown RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 CASP8Q14790 479 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 TXNRD3Q86VQ6 643 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 STMN4Q9H169 189 aaPredicted RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 TMEM60Q9H2L4 133 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 TPX2Q9ULW0 747 aaKnown RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 LGALS16A8MUM7 142 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 ATP2C1P98194 919 aaPredicted RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 SNX1Q13596 522 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 ALKBH5Q6P6C2 394 aaKnown RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 KIF9Q9HAQ2 790 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 BARHL2Q9NY43 387 aa13.31□□□□□ -0.28
BDNF-218ENST00000533246 PACSIN2Q9UNF0 486 aaPredicted RBP13.31□□□□□ -0.28
BDNF-218ENST00000533246 F5H6K3 240 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 NCK2O43639 380 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 RNF40O75150 1001 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 SKAP2O75563 359 aaPredicted RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 TBC1D8O95759 1140 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 KLRC3Q07444 240 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 PDCD2Q16342 344 aaPredicted RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 QRICH1Q2TAL8 776 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 SEPT14Q6ZU15 432 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 RETREG2Q8NC44 543 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 WHAMMQ8TF30 809 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 DNAI2Q9GZS0 605 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 TRIM10Q9UDY6 481 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 PNPLA7Q6ZV29 1317 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 WDR19Q8NEZ3 1342 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 LRRC53A6NM62 1247 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 SMIM22K7EJ46 135 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 PLTPP55058 493 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 STK4Q13043 487 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 RASA3Q14644 834 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 DENND2CQ68D51 928 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 OTUD6AQ7L8S5 288 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 THAP9Q9H5L6 903 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 MAGEF1Q9HAY2 307 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 DNAJC17Q9NVM6 304 aaKnown RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 CLTCQ00610 1675 aaKnown RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 ZBTB5O15062 677 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 SFR1Q86XK3 245 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 UBE2TQ9NPD8 197 aaPredicted RBP13.3□□□□□ -0.28
BDNF-218ENST00000533246 ATP8A1Q9Y2Q0 1164 aa13.3□□□□□ -0.28
BDNF-218ENST00000533246 ABCD1P33897 745 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 PSMC2P35998 433 aaKnown RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 ANKRD40Q6AI12 368 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 NCAPG2Q86XI2 1143 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 ADGRF4Q8IZF3 695 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 FERMT1Q9BQL6 677 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 PFDN1O60925 122 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 ADCY8P40145 1251 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 OSTNP61366 133 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 MYL7Q01449 175 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 GNPTABQ3T906 1256 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 B4GALNT4Q76KP1 1039 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 KIRREL3Q8IZU9 778 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 CAPS2Q9BXY5 557 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 AGPAT5Q9NUQ2 364 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 FAM184BQ9ULE4 1060 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 PCDHA6Q9UN73 950 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 PCDHA8Q9Y5H6 950 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 NTSR2O95665 410 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 POLGP54098 1239 aaPredicted RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 AOC3Q16853 763 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 THOC1Q96FV9 657 aaKnown RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 DHX36Q9H2U1 1008 aaKnown RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 VPS37BQ9H9H4 285 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 C1orf112Q9NSG2 853 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 TRPC6Q9Y210 931 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 TNFAIP1Q13829 316 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 EAPPQ56P03 285 aaPredicted RBP13.29□□□□□ -0.28
BDNF-218ENST00000533246 SCYL2Q6P3W7 929 aa13.29□□□□□ -0.28
BDNF-218ENST00000533246 UNC13DQ70J99 1090 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms