RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ZNF771Q7L3S4 317 aaPredicted RBP16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 NEK11Q8NG66 645 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 CEP63Q96MT8 703 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 CRACR2AQ9BSW2 395 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 MLXIPQ9HAP2 919 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 VAV3Q9UKW4 847 aa16.96■□□□□ 0.3
CACNA1E-208ENST00000533229 POTEB2H3BUK9 544 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 TLR2O60603 784 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 HOXD13P35453 343 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 MARSP56192 900 aaKnown RBP16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 ADAM9Q13443 819 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 SYT2Q8N9I0 419 aaPredicted RBP16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 REEP2Q9BRK0 252 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 SH2D4AQ9H788 454 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 SALL4Q9UJQ4 1053 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 L1RE1Q9UN81 338 aa16.95■□□□□ 0.3
CACNA1E-208ENST00000533229 PDE2AO00408 941 aaPredicted RBP16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 EML1O00423 815 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 POLR3GO15318 223 aaPredicted RBP16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 SLC26A4O43511 780 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 GFPT1Q06210 699 aaPredicted RBP16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 CACNA2D4Q7Z3S7 1137 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 ZC3H3Q8IXZ2 948 aaKnown RBP16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 ZBTB9Q96C00 473 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 FAM20AQ96MK3 541 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 DEF6Q9H4E7 631 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 DNM3Q9UQ16 869 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 IGLV3-22A0A075B6J6 115 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 AKR1B10O60218 316 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 FAM83BQ5T0W9 1011 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 CDAN1Q8IWY9 1227 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 RGL1Q9NZL6 768 aa16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNA1E-208ENST00000533229 ANO9A1A5B4 782 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 RSPH10B2B2RC85 870 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 MOCS3O95396 460 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 RSPH10BP0C881 870 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 POLD1P28340 1107 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 OAS2P29728 719 aaKnown RBP16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 STAT2P52630 851 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 MCTP2Q6DN12 878 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 SFR1Q86XK3 245 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 EDEM3Q9BZQ6 932 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 TSGA10Q9BZW7 698 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 JADE2Q9NQC1 790 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 PIK3CDO00329 1044 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 CYP3A4P08684 503 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 POLR2FP61218 127 aaKnown RBP16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 ANKRD13CQ8N6S4 541 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 ERMNQ8TAM6 284 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 WDR18Q9BV38 432 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 LSM14BQ9BX40 385 aaKnown RBP16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 BHMT2Q9H2M3 363 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 CEP72Q9P209 647 aa16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 HERC5Q9UII4 1024 aaKnown RBP16.93■□□□□ 0.3
CACNA1E-208ENST00000533229 H3BQF6 201 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 USO1O60763 962 aaKnown RBP16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 RAD17O75943 681 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 GNA14O95837 355 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 MYBP10242 640 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 NR2F2P24468 414 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 USP14P54578 494 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 EDRF1Q3B7T1 1238 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 EPM2AIP1Q7L775 607 aaPredicted RBP16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 TRIM58Q8NG06 486 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 DRC1Q96MC2 740 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 EIF2AK1Q9BQI3 630 aaKnown RBP16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 RUSC1Q9BVN2 902 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 TMX2Q9Y320 296 aa16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
CACNA1E-208ENST00000533229 PRPF6O94906 941 aaKnown RBP16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 CFBP00751 764 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 ZNF76P36508 570 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 MAGEA1P43355 309 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 WDR93Q6P2C0 686 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 ZFP91Q96JP5 570 aaPredicted RBP16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 JRKLQ9Y4A0 524 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 SSU72P8A0A1W2PR75 194 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 ZBTB39O15060 712 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 ERLIN1O75477 346 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 UBXN2AP68543 259 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 RASSF7Q02833 373 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 KCNA1Q09470 495 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 KCNH2Q12809 1159 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 SLC15A2Q16348 729 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 KNOP1Q1ED39 458 aaKnown RBP16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 CCDC174Q6PII3 467 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 CREG2Q8IUH2 290 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms