RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 MTMR1Q13613 665 aa20.43■□□□□ 0.86
PCF11-206ENST00000533018 ADAMTS19Q8TE59 1207 aa20.43■□□□□ 0.86
PCF11-206ENST00000533018 SEPT8Q92599 483 aa20.43■□□□□ 0.86
PCF11-206ENST00000533018 EHMT1Q9H9B1 1298 aa20.43■□□□□ 0.86
PCF11-206ENST00000533018 RBM28Q9NW13 759 aaKnown RBP20.43■□□□□ 0.86
PCF11-206ENST00000533018 NAP1L2Q9ULW6 460 aaPredicted RBP20.43■□□□□ 0.86
PCF11-206ENST00000533018 ITGB5P18084 799 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 POU3F3P20264 500 aaPredicted RBP20.42■□□□□ 0.86
PCF11-206ENST00000533018 HOXC8P31273 242 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 TFF2Q03403 129 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 GDPD5Q8WTR4 605 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 SEPT1Q8WYJ6 367 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 GLG1Q92896 1179 aa20.42■□□□□ 0.86
PCF11-206ENST00000533018 ZBTB43O43298 467 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 CAND2O75155 1236 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 KCNA2P16389 499 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 MARK3P27448 753 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 NAPAP54920 295 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 FGD1P98174 961 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 RTN1Q16799 776 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 AAK1Q2M2I8 961 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 PLEKHG4Q58EX7 1191 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 DHX32Q7L7V1 743 aaKnown RBP20.41■□□□□ 0.86
PCF11-206ENST00000533018 LMBR1Q8WVP7 490 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 TGS1Q96RS0 853 aaKnown RBP20.41■□□□□ 0.86
PCF11-206ENST00000533018 UHRF1Q96T88 793 aaPredicted RBP20.41■□□□□ 0.86
PCF11-206ENST00000533018 INSL6Q9Y581 213 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 NRCAMQ92823 1304 aa20.41■□□□□ 0.86
PCF11-206ENST00000533018 BDP1A6H8Y1 2624 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 LINC01553A4QN01 128 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 CDC45O75419 566 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 COL4A4P53420 1690 aaPredicted RBP20.4■□□□□ 0.86
PCF11-206ENST00000533018 WWC2Q6AWC2 1192 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 JADE2Q9NQC1 790 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 BRPF3Q9ULD4 1205 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 UBIAD1Q9Y5Z9 338 aa20.4■□□□□ 0.86
PCF11-206ENST00000533018 V9GY48 417 aaPredicted RBP20.4■□□□□ 0.86
PCF11-206ENST00000533018 CNTNAP5Q8WYK1 1306 aa20.39■□□□□ 0.85
PCF11-206ENST00000533018 UPP2O95045 317 aa20.39■□□□□ 0.85
PCF11-206ENST00000533018 EXOSC10Q01780 885 aaKnown RBP20.39■□□□□ 0.85
PCF11-206ENST00000533018 KRT32Q14532 448 aa20.39■□□□□ 0.85
PCF11-206ENST00000533018 ADCK5Q3MIX3 580 aa20.39■□□□□ 0.85
PCF11-206ENST00000533018 RASEFQ8IZ41 740 aa20.39■□□□□ 0.85
PCF11-206ENST00000533018 ERAP1Q9NZ08 941 aa20.39■□□□□ 0.85
PCF11-206ENST00000533018 KLF18A0A0U1RQI7 1052 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 GSTTP1A0A1W2PQM5 241 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 GOLGA8AA7E2F4 631 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 GOLGA8BA8MQT2 603 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 MAFGO15525 162 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 LPXNO60711 386 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 ADCY7P51828 1080 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 ERVK-21P61565 698 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 PPFIA1Q13136 1202 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 RSPH3Q86UC2 560 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 PGBD1Q96JS3 809 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 YME1L1Q96TA2 773 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 SMARCAD1Q9H4L7 1026 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 SIP14410 1827 aa20.38■□□□□ 0.85
PCF11-206ENST00000533018 KCNQ1P51787 676 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 IGBP1P78318 339 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 ADAM17P78536 824 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 GRIK4Q16099 956 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 RUFY4Q6ZNE9 571 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 IFIH1Q9BYX4 1025 aaKnown RBP20.37■□□□□ 0.85
PCF11-206ENST00000533018 AZI2Q9H6S1 392 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 JPH1Q9HDC5 661 aaPredicted RBP20.37■□□□□ 0.85
PCF11-206ENST00000533018 RIC8AQ9NPQ8 531 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 COG5Q9UP83 839 aa20.37■□□□□ 0.85
PCF11-206ENST00000533018 SMCO2A6NFE2 343 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 FOSP01100 380 aaPredicted RBP20.36■□□□□ 0.85
PCF11-206ENST00000533018 HMGB1P09429 215 aaKnown RBP20.36■□□□□ 0.85
PCF11-206ENST00000533018 TSGA10IPQ3SY00 556 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 TYW1BQ6NUM6 668 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 TAF2Q6P1X5 1199 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 FBXO22Q8NEZ5 403 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 APBB2Q92870 758 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 HLA-CQ95604 372 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 MXRA8Q9BRK3 442 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 SDF4Q9BRK5 362 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 C17orf80Q9BSJ5 609 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 KCNH7Q9NS40 1196 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 LMCD1Q9NZU5 365 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 TUBE1Q9UJT0 475 aa20.36■□□□□ 0.85
PCF11-206ENST00000533018 GHRP10912 638 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 BMP1P13497 986 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 ZNF76P36508 570 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 FAM26DQ5JW98 314 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 PPP1R18Q6NYC8 613 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 CYP2W1Q8TAV3 490 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 TOP1MTQ969P6 601 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 NECAB3Q96P71 396 aaPredicted RBP20.35■□□□□ 0.85
PCF11-206ENST00000533018 ANO3Q9BYT9 981 aa20.35■□□□□ 0.85
PCF11-206ENST00000533018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.34■□□□□ 0.85
PCF11-206ENST00000533018 hCG_1984214I3L0E3 225 aa20.34■□□□□ 0.85
PCF11-206ENST00000533018 STXBP3O00186 592 aa20.34■□□□□ 0.85
PCF11-206ENST00000533018 CHRNA1P02708 482 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms