RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
SSH3-210ENST00000532881 MYBP10242 640 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 CRKP46108 304 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 UBXN2AP68543 259 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 CCDC181Q5TID7 509 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 SLFN13Q68D06 897 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 GJB7Q6PEY0 223 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 TSEN2Q8NCE0 465 aaKnown RBP16.43■□□□□ 0.22
SSH3-210ENST00000532881 COA1Q9GZY4 146 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 KCTD10Q9H3F6 313 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.43■□□□□ 0.22
SSH3-210ENST00000532881 LY75O60449 1722 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 ARFGEF1Q9Y6D6 1849 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 CLIC2O15247 247 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 HOXD13P35453 343 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 PPP1R2P41236 205 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 NT5C2P49902 561 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 CRAMP1Q96RY5 1269 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 TSGA10Q9BZW7 698 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 AJAP1Q9UKB5 411 aaPredicted RBP16.42■□□□□ 0.22
SSH3-210ENST00000532881 LCA5LO95447 670 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 NR2F2P24468 414 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 CASP4P49662 377 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 KCNH2Q12809 1159 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 BCS1LQ9Y276 419 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
SSH3-210ENST00000532881 hCG_1984214I3L0E3 225 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 HLA-DOAP06340 250 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 TUBB4BP68371 445 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 CERKLQ49MI3 558 aaPredicted RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 TAF3Q5VWG9 929 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 HAUS3Q68CZ6 603 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 LRRC31Q6UY01 552 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 TRIM59Q8IWR1 403 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 ZNF713Q8N859 430 aaPredicted RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 PIGOQ8TEQ8 1089 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 KCNMB3Q9NPA1 279 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 BMP2KQ9NSY1 1161 aaPredicted RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 FGFR1OPO95684 399 aaKnown RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 GLI1P08151 1106 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 FAM153BP0C7A2 387 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 SLC12A3P55017 1021 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 ARHGAP4P98171 946 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 PSMD2Q13200 908 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 FAM153CQ494X1 144 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
SSH3-210ENST00000532881 ZNF622Q969S3 477 aaKnown RBP eCLIP16.41■□□□□ 0.22
SSH3-210ENST00000532881 FAM198AQ9UFP1 575 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 FAM153AQ9UHL3 310 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 HYOU1Q9Y4L1 999 aa16.41■□□□□ 0.22
SSH3-210ENST00000532881 SPATA31C1P0DKV0 1188 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 SPIRE1Q08AE8 756 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 KIAA0753Q2KHM9 967 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 SLC9C1Q4G0N8 1177 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 TCERG1LQ5VWI1 586 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 CCDC65Q8IXS2 484 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 C10orf67Q8IYJ2 551 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 ALS2CR12Q96Q35 445 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
SSH3-210ENST00000532881 AFF2P51816 1311 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 TARSL2A2RTX5 802 aaKnown RBP16.4■□□□□ 0.22
SSH3-210ENST00000532881 TULP1O00294 542 aaPredicted RBP16.4■□□□□ 0.22
SSH3-210ENST00000532881 CHMP2AO43633 222 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 EPS15P42566 896 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 ORC2Q13416 577 aaPredicted RBP16.4■□□□□ 0.22
SSH3-210ENST00000532881 GOLGA5Q8TBA6 731 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 AENQ8WTP8 325 aaKnown RBP16.4■□□□□ 0.22
SSH3-210ENST00000532881 IFT81Q8WYA0 676 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 PSD3Q9NYI0 1048 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 CEP72Q9P209 647 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 RSPH14Q9UHP6 348 aa16.4■□□□□ 0.22
SSH3-210ENST00000532881 F5H6K3 240 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 EML1O00423 815 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 ADRA2BP18089 450 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 CARSP49589 748 aaKnown RBP16.39■□□□□ 0.22
SSH3-210ENST00000532881 KLRC3Q07444 240 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 KLHL30Q0D2K2 578 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 GIT2Q14161 759 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 LEKR1Q6ZMV7 388 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 NOX5Q96PH1 765 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 BHMT2Q9H2M3 363 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 SWAP70Q9UH65 585 aa16.39■□□□□ 0.22
SSH3-210ENST00000532881 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 GOLGA6BA6NDN3 693 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 PTK2Q05397 1052 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 MAP9Q49MG5 647 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 MMGT1Q8N4V1 131 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 AFAP1L1Q8TED9 768 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 LENG9Q96B70 501 aa16.39■□□□□ 0.21
SSH3-210ENST00000532881 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms